Gene detail

Detailed information of XP_065058722.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1:2677002...2691116
NR annotation: no NCBI-NR hit recorded
Species abbreviation RESCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065202650.1

ACTGCAATCAAGTATGGTCTGGTCTCGAACTGGGACAAGAACTCAGATAAGTTTGGCgggaaaaggttttttgaagCAGTCTTGAATCCAGATAAATCGTAAACAATCGCCAGAAAATACTACTTGTTTCTTATAAGCGTCTCGATGATGGAATTGGAACAAGACTACGCATCAGATGTGGTGGAGCAAATCATAGAGATTGCAACAAGATTGGGTTTGCATGGTAAAAATGCACCCTCCATTGATACCTACATTGCAAAGcTTGAGATGGCCATTGCTGAAAACAAAGaatcAGAATGTTCTTGTGTCCAAAGTTACTACGAATCTCAAGCTAGACTTTCATCGGATGAAGaattttattcagaaaaagCCATAGCCATCGAAAAAACAAGGAtagagcaaaagaaaaagaagagaagatCTGTTTGTATTCAACGAGTTCCTTCTTGTTCatctgatgatgatgatgatgatgatgatattgattttaatgGCACTAAAGAAAATGAAGTCGTCCAAGAAATCAATAAAGAGGAAAACTATGAATTGTCCGAAGATGCTGCCGACGATGACGATAGCTTTAATGCCTTTGTTAGCAAAGTGAAGACGAGCAGTAGGAAAAAGACAGCCGTTTTGCTGTCATCTGATGACGAAGATGGATCAAATTCAGAAGAAAACAGCATGGATGATTTCATAGTAAGTGATGGATCGATGCCAAATACTCCTGATAAGCAATCTTGGCGAACACCAAAAATACCTGAGGCCGTCATATCATCTTCTGAAGAAGAAAGTTACAAAGAGGATGAACACTTCACTTCTCGAGGCAAAAAAGTTACTAAGTTTCAAACTCCACGCATTAAAACTCCAATGTCCTCAAGACGACATGCTCGATGCACACCTGGCATCTTGGACCGTGTTACGACCCCTAAGACACCTAGCGGTAGTGTTTCATACAAGAGAGATTTCAAGAAGTTAAGAGACCAAACTGCTAAGGAATTGCTAGATCTTTTCAACGAAACTGTCTTCGAAAACAAGCTTCCTGATATTAACATCGTCTTCAATAAAAGAATGACCAAAACTGCAGGGTTTTGCTACTATTATCGaAATCAAGTCACGAAAGCAAGAACAGCTAAAATTGAGCTCGCCGAGAAAGTTTGCGACTCCGTCGAACGACTTCGAGATACGATGATTCATGAAATGTGCCACGCTGCCGCGTGGATATTGAATGGAGTGAAATGCGGTCATGGAACCTTCTGGAAATATTGGGCGAGCAAAGCACACAGAGCCCATCCTGACTTGCCCCCAATATCAAGATGCCATCAATTTGATATAGAATGCCGCTTCAATTACAGATGTATCAACCCATTTTGCGGCAAAAGTTATGGCCGTCACAGCAAGTCTTTAAAGAAATGTCCAGACTGCAACGGATCGCTACAGTTACTTGGAAAAGATGGCATTACTCCGTTAAAGCCAAGAGTGCCAAATAAATTTGCTCTTTatgtgaaagaaaattatccCCCGGTCAAAGCTGATCATCCCAATATGTGTCATGCAGATATCATGAAGTTGTTAGGGACAAAATTTAGCATGCTGAGCACATAGATTGTTTGAATGCAAGTTTTCATTCTGTTTCTGCAATCAAATGCTGCAATAAGAGCCAAAGGATGTCATGTTACCAGCCTTTTTAAATTTACGATTTTATGCCAAATATCCAGATTTTTAAGTTAAGAATGAGTAAAagacatttgaaaactttttaagccATGATTAGTACTATAATTAGCATcttagcttttatttttggaCATGATTTATAGTTTTATAGAAAGAAAGTGAGAAAATTGCTTTGTGCTTTTCTGTTACAATGTCTTACACATATAAATATCTAATGATGTGCAGTAAAAATCATTGGCAACCGTCAAATGCCCAAGCTCTAGTTAAAGATTTTGATTCACGATAAAAAGAGAGGGTATACACAATTGTACTGAGTCATGATATTAGCGCTGCACTGCTATTGGTGGTGCTGAGACTgatcacaaaaaaattgtcttgaaataatttcaaaaggagCTTATGTCAATGACCAATGTAAATGATGGTCACCAAAGTCTCATGAAACTACACTGATCACACAATAGAGTGAAGGCTGCCTGCAGACGATGCCTTTTAGAAGCAGTATTTACTCCATTTAATTGTTCTCAGAATCTCCTTTCATGGCCACGATTTTCAATGACACAAATATTTGTTGGTTTGATGCACAAATAACCAATCAGAATGAAGAACCACCATAGTGTGCTCTTCCTGAGTGACTTGCTGTGAATtctgttttggtttcaaatGTCTAAGTCAGTTTGGATGATATAAAGATCCAGCCCTTTTGGAAGTGTTCACCCACAACTGATGTCTGATGCCAAAAAGGCAGTGGATAAACCTCTTTGAAGACAAGGCTTTCAAGTTAGAATCAGCCAATCATGGAGGGAACA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10263 all species →	SprT-like	SprT-like family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910 all species →	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR006640 all species →	Domain	SprT-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23099 all species →	TRANSCRIPTIONAL REGULATOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26957	GCNA, ACRC; germ cell nuclear acidic protein	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.