Gene detail

Detailed information of XP_065059016.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1:6423386...6435679
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002318 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107 all species →	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF16884 all species →	ADH_N_2	N-terminal domain of oxidoreductase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013149 all species →	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR045010 all species →	Family	Medium-chain dehydrogenase/reductase	Interproscan
IPR011032 all species →	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR020843 all species →	Domain	Polyketide synthase, enoylreductase domain	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR014190 all species →	Family	Leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase	Interproscan
IPR041694 all species →	Domain	Oxidoreductase, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43205 all species →	PROSTAGLANDIN REDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006693 all species →	Biological Process	prostaglandin metabolic process	Interproscan
GO:0016628 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	Interproscan
GO:0047522 all species →	Molecular Function	15-oxoprostaglandin 13-oxidase [NAD(P)+] activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0032440 all species →	Molecular Function	2-alkenal reductase [NAD(P)+] activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13948	PTGR1, LTB4DH; prostaglandin reductase 1	EC:1.3.1.74 EC:1.3.1.48	Arachidonic acid metabolism	ko00590	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.