Gene detail

Detailed information of XP_065059369.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_107:6504791...6509538
NR annotation: no NCBI-NR hit recorded
Species abbreviation RESCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065203297.1

AAAACAAGACTGACTGGTACATACTGCGTCATAATTCGTTGTGCTGTGAAGGCAACAGTACGAGTTATACAGTccggaaaaattttttctgaacgAAGAAAATTCTAAGATGGCAAGGTTGATGTGTCAAACAGCTGTAAGACAACTTCTTCGAGGCAGAGGAACTTCACTCCCACTCTCACGACTGGCAAGCAACGAAGCTGTGTCTTCTTCTACGGATGATTTGAAGGTCAGAAGAAGCGACTCTCTTGCGAAACCATTGATGCAAAGACAAGGCCATTTGCTGTCAAATCCAAGAACTGAATACAGAACAGTCTACAAGTACCAAGGCAAAATCAAGGCAGTCATTTTGGACTGGGCTGGTACAGTTTTGGACTGCGGTGTGTATGCGCCAGCAGTTGCTTTTgttgaagttttcaaaaatgaaggGGTCCCAATCACGATGGATGAAGCAAGAGAACCCATGGGTACTTACAAGAAGGTCCATATCAGAAAGATAACACATCAAGAGTCTGTAAGGCAAAGATGGTTTGAGAAGTTTGGAAAGTACCCTGATGAAGAAGATGTTGAAAGAATGTTCGATAACTTTGTTCCTACACAGCTGGCTTGTTTACGTCAGTATTCAAAAATGATTGACGGGGCAGTTGATACAGTCAAACACATGCAGAAGAACATGGGAATGAAAATTGGCTCAACTACTGGCTTTACTAAAGACATGGTTGATATTTTGAGAGAAATTGCCAAAGAAGCTGGGTATGTTCCAGATGCCTATTTTGCTGCAGATGAAGTTCCCCAGGCAAGACCCTACCCTTATATGGTTTGGGCAAACTGCATCAAGCTTGACGTAAATCCAATTCAAGCAGTAGTGAAAGTTGATGACACTGCTGATGGTGTTAGAGAAGGCATTTTAGCTGGATGTTGGAGTGTAGGACTGGCAAGAACGGGAAACTATGTGGTGAATGAAGAGgagatttcaaaattgtctGCTGAAGATTATGAAAGAAGGCTTGAAAGGTCTTATGGCATCTTGGCTAATGCTGGGGCCCATTATGTTATTGACACAATCAATGATTTGCCACCAGTTATTGACGACATCAACAGGAGGCTTGCTGCTGGTGAAAGCCCATAAGATGTAGATTATATGCATCTAAGGTCAAGCTATTAACAGTTTGAATAACTTATTACCAAAATGCCATAAGCAGCGCTATATGACCTCTTTTACAAGTTTTTTCATTGCGCAGCGTTTTAATTGGTTGTGGATTTTgttctcaaattttatttagttagaatgtaatttttgtatttaagtttatcattttgaagaatgatttgataatttagagGATTTTGGATGTTTGAAGGATTTAAGGTAAGAAATTGGTATTAAGATGAAAAGTAATCCAAATGTAATGAATTAGGCATagtgttttatttcaatattctgaGGGGGTGAGGGGGAATAGTCTAGGCATAGtgctttttttgaaagaaaaagatgtcAGTAAAAGCTGAAGAATATTGTTAATAAAATCATAATCATATTCAACCAAGGTCAGAAATTATAATTAGCAGAAGCTCTGAACAAGTTTGGCTATCATTTATTGGCAATACTATATACTGAAACGTGGGGATCATTCCCCTTTTGCCATTTGCCTAGCAGAGGCTAAACATTTAGTAGGACTTAGTATGGGGCTTGCTCCAATATTGTTGTTTCATTGTGATTGTAATGCCTGAATTTGCCTGAAATTCATAACATTTATCTgatttgggggaggggggcagcACCTTAGAAAGAATTGgcttttgtctcttttttctGGCATTGGTTTACTGTTTGAGGAGTACGTTTTTGAGAACAgatcagataatttttttgttgggATGGTCCATACCATTTTTCTCCAAGGTAGACTTATATTATTTCCTGAAATCtaaatgttgtaaatattgtttttcaaagctttgtgTTCAATGCTTTTGTTTGTTAGATATCTATAtcatgttttagaattttttggtttgaaattAAACTTGAACTAGAAACGTTTAATGgatttttcttgcatattagctttggcaaaaaatgttcttgtAATCAGGGATCACGGAAAACTGtcagatttttataaatttgataaataactTTACCGTCTACAACTGCAAAGTATAAAGAGTGCATCAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00702 all species →	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006323 all species →	Family	Phosphonoacetaldehyde hydrolase	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR050155 all species →	Family	HAD-like hydrolase superfamily	Interproscan
IPR023198 all species →	Homologous_superfamily	Phosphoglycolate phosphatase-like, domain 2	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43434 all species →	PHOSPHOGLYCOLATE PHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019700 all species →	Biological Process	organic phosphonate catabolic process	Interproscan
GO:0050194 all species →	Molecular Function	phosphonoacetaldehyde hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05306	phnX; phosphonoacetaldehyde hydrolase	EC:3.11.1.1	Phosphonate and phosphinate metabolism	ko00440	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.