Gene detail

Detailed information of XP_065059536.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_217:10017294...10019365
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065203464.1

GGATTTTCCGATGATGCGATCGGATTTCCGGCAAAAGTTGAAGCACTCTGGGCTTGCTGAAAAAGAGGTTGACCTGACACTTACCCTCTCTTCCAAAACGCAACTATGGCGGATGATCTTGATGCCATTTGTACAGATCTTGACACACTGATGCGAAAGTTTTTCGTAGAATGGAGCAGATATCGCTATTTTATGGAAACgttatcaaaaaatgtaaaaaatggTTACTTGAACATCTCGAAAACAAGATACTCGATAGGTGTTGGCTCAATTAGTGAGCTTCAGATTCCAGACCATGAGTTTAGGCCGTTGGTTGAAGTAACCTGCAACGAGCATATGTCTGCTGAGAAACACGAGAAAGATATTATTGAGTTAATCTTCTTTCATACAGGTAAAAAGCCCCAAAACATGAATGTGGAGATAAGCAACCAAGGAGATGCGGCTACAAATACTGTAAGAAAACGTTTTATACAAACAACGGAAATTGTGAATACTGATGATGCTGGATccaaaaagcaagaaagtGAATCAATTATGGAGgaaagtgacaaaatttcacattgtACCAATGAAACAGAACTACGGCCTGATCCACTGAAATGGTTCGGGTATCTTGCGCCAACTTGTTTGAGACAAGGTCAAGTTTCCTTTCAAGAGGCCACAAATAATGTAGTTCAAGCTGTTAATGCCAAGATAAGGCTTCATAGAATAATTCTTGACTTTGAGGAGctcaagaagaaaaagcaaaaacttctTTCAGATGTAGAAACTGTCTCTTGTAGAAGTGATACTCAGGGTAATTAATAGTTCAAACAGGGTTATTTAATTGTAATTACTGTAATTTGTTTCTAGCTttggcttttgaaaataaatagcttatcttttctgttaaattaaaaatattgcagaaATACTAAAAGTgatagaattttgaaaaacttgaagtatattaatctttcatttgttgctactaagataaaataaggaactaaGATAGTCTAACTAAACCCTCAATTTACCTCCCTTTTTGCATCCCAATTTCCTGTGGAACAGGCTCTGTTGTCCGAAACAAGACCACCTTTGACAAGAGCAAGCCTTGCCGAAGCAAATGAGCTGTTGGTCTTACATTTCTATAATGTTTTAGTACGGTTTCAAGCTACTTTTCCTTCACAAAAttgtgtcaatttttttattttgaaaaatttgatacaaataCCTTCTGAGTAGctattaaatttcaaaaatatcaattaaaatagaaatttagtTAAGTAACACAGTCTTAAGGCACTGTTACAGGGGTACATATATCTTCATTATCAGGTACCATCTTttatcagaaggttggctaccatgaccctcaAACTATCCCAAAGTCttgagttttggtttgttgtcatggtcataaataaaattaaggGGCTAATAGTAGAGATGGACCCCCAGAACCACCTCTACAGGGAAGGGACGCTTTAATTCCCCATTCATGTCCTGTCAGAGCATGCCCCTGCCACTGGTACATATATATTATCAAGATATCTTATTGctcaaatatatttattacTTGTATAGACAGgataagtttgttttcactCTTGAGCCCTTTAAATATGTGAGAGTTTAGTAGCTGTTGATTGGTCAaaacaaggaaccaatcaaaagTGTACATAAATTCCAAAAAAGACAAGCTCTAttagtgaaaaaattaaacatgaCTGACTTAAAAGAGACTAATCAGGGAAAATAGGAAAATGCACTTTGCAGAAGGTGTGGAGCTCGGGAGGGAACCATCAAgaacttaaaacaaaagaataccaaaatagaaaatttactgaaaaaaagacgctaaaaacttttaaggATCAAAGAAAAAGTGGACCCATTTTAATGCCTGTGTTATTGCTTCAGTGTCTGAAGAACGTGTGACTGTTCCAGAATGGAGAAGGCAGCCCTGATActgttattattattgatCAAATAATAATTCTTCTTTccatgttattttttgttccCATCCGGATATGATGTTATGTTTAACCTTAATTCTCattattcaatatttactACCTTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21730 all species →	Vma22_CCDC115	Vma22/CCDC115	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040357 all species →	Family	Vma22/CCDC115	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31996 all species →	COILED-COIL DOMAIN-CONTAINING PROTEIN 115	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0070072 all species →	Biological Process	vacuolar proton-transporting V-type ATPase complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23543	CCDC115; coiled-coil domain-containing protein 115	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.