Gene detail

Detailed information of XP_065060259.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_217:12395013...12404256
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065204187.1

TATTGCATAATCTATCGAGTACCCGCTTGGCAAGGTGAAATTGGAAGTTAAGGCAGGTGAACCGCAGGCAAAGATGTTTTGAACAGGTGTCCAAATTTCAAGGCTACATTCAAAATACATAAACATGAGAGCATTATCTGAGGCTGTTTTGTAGCATGCGACCATGATGAATAGCTGTAACGTACCTTGAATAAGGACGCTTGACTTCCTATGTACCTGGTATCCTAAGATAGGACCTCTAGGCCTGTTTGACTGTGGGCTACCCGttgttcattttgaattgtttgtaATAGCATGTAAAAGTCAGTCAAGGAGACAGATCAACTAAACCTAGAGAAAGATGAGAGGACCACGAAGTGTTACAAGTCATTTCTTGAGGCCTGTCAGGTTTGCAAGAAGCCCGAGAACTGCTGAGAAAGATAATGCGGTATTCAACAGAATTTGCATCCTCCGAAGTGCCTCGTTGCACAGCCACAGCAGATTTATGGAAGCTTCCTCAAACATTATAAACTTGAGTGTAGTTAATTCTGTGCCAGTTTATGAACTGCGAAATGAATATGAAAGAGCAAAGACAAAGGCCCTTTCTCACACActaaacaatcaaaatgacaTAAGTGTTGATGCAGTGTTTGCAAACAACGAAATTAGCCTTAAGTACATTGATGTTTATGGCTTTGACTATGATTACACTTTGGCCAGCTACTCCGACCAACTGCACATGAAAACCTATGACATTGCTGTGAACAACCTGATTGAGATGTTTGGATACCCAAAGCAAATCAAGTCAATGCGATATGACCCAGGCTTTGCTATAAGGGGATTGCACTTTGATACACGGAAAGGCTTGTTAATGAAACTTGACTCATTTAGTCACATCCAAATTGGGACAGTCTATAGGGGGCGTCAAGAAGTGAACAGCTGGGATGTTGTCAATTATTACGGTGGGACACATCTTGGTATTGACCAGGTCAGCCATGCCAACAAGGGAACTGACACATATATTCATCAGCtgattgatttattttcactgCCCTTTATGGGTCTTCTCTCCAATGTCATTGAGTATCTTTATCAGAACAACATAACTTATGATCCAGAGTATGTTTATTACGACTGTGAGAGAGCTACCCAGGCAGTTCATTATAAAGGTGTCATGTATGATGCAATCACAGGCAATCTAGAAAAATACCTACCCGCCAATCCAGAGATGAAGGAGTTCTTGCACAAACTGAAGCAACATGGCAAGAAGCTGTTTATGATAACCAACAGCAAATACAATTTTGTAAACAAAGGAATGGTTCACCTGATGGGCCCTGACTGGAGAGACCTCTTTGACGTCATAGTCACCGATGCAAGGAAGCCGAGGTTCTTTAATGACATTCAAAGGCCTTTTCGATGTGTCGATACGGCAACTGGATTTCCAACTTGGAACCAAGTGAACCAGTTTGAACCAGGAAAAGTCTACTCAGAGGGGAACATCAAACTGTTTGCTCGTTTTACAGAATGGGAAGGTCCACATGTTTTGTATTTCGGAGACCACGTGTATAGCGATTTGATGGATCCAGTTATGAGGCATGGCTGGAGAACTGGTGCTATTTTGCCGGAACTTGAGCGAGAAATCATGATATCTAACTCAAAAGAGTACAGAAGAAATGTTCAGTGGTTGCTTGCCCTTGAAAATCTCATGGCAATAGCTCAGGTCCACAATGAAATAGAAgcgaaaaatttattttttgaatggaAACACGAAAGACGAGAGCTCAGGCAAAAGctgaaaagtattttcaatcCTTTCTTTGGAAGCGTCTTCAGAACGTATCACAACCCGACATACTTCTCAAGGAGGTTGACGCGATATGCAGATATATATACAGCAAAAATGTCAAATCTGTTAGAATACCCCCTAGGGTACACGTTTTACCCGCGGAGGCACCATCTGCCCCATGAACATGACATTAACTGAAAAAGCTAACAACACTTCAGTTACAATAGAATGGTGTTTATATTGTAAATGCAGGaattttagcaataaaaacaaaaatagtttGTAAAATCATAAATTCAGAGTTTTCATGCATTCATTAGTTTACATTTAGTTCTAGTTTCGTGTTTAAAACAAATGGTTTTAGAAAATCGGATTTGTGCTATTTTCTCAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05761 all species →	5_nucleotid	5' nucleotidase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008380 all species →	Family	HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR016695 all species →	Family	Purine 5'-nucleotidase	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12103 all species →	5'-NUCLEOTIDASE DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008253 all species →	Molecular Function	5'-nucleotidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065060259.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.