Gene detail

Detailed information of XP_065060437.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_217:8804526...8898389
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00237 all species →	Ribosomal_L22	Ribosomal protein L22p/L17e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036394 all species →	Homologous_superfamily	Ribosomal protein uL22 superfamily	Interproscan
IPR001063 all species →	Family	Large ribosomal subunit protein uL22	Interproscan
IPR005721 all species →	Family	Large ribosomal subunit protein uL22, eukaryotic/archaeal	Interproscan
IPR018260 all species →	Conserved_site	Large ribosomal subunit protein uL22, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11593 all species →	60S RIBOSOMAL PROTEIN L17	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan
GO:0002181 all species →	Biological Process	cytoplasmic translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02880	RP-L17e, RPL17; large subunit ribosomal protein L17e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.