Gene detail

Detailed information of XP_065060922.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_359:3244873...3258205
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065204850.1

ACTTATTAGTCTGCCAGGCGGAGGGTAAGTCTGGGAAATAGGTTTGTAAATAGCATGGTGAGAGCACTCCAGGAAGCATATTGATTGCAAGACTTCTAAGTGCTATGCAAAAGTGTATAGTAATTGGCTCGGGGATACAACTCTTCACTGGAAAACGTCATGgcataaattttgcattatatAGTTCTGTACGGCTGAAGAGGGGATACTGGTTCGTGTCGTGGTACTATGCTGTGATCTTGTCAAAATGGAGAACTGTCtgttattaaatttattgcaatgCACATAAGGGAGATTTAATAATTTGCAAGGTAATGTAAATAATAATTAAGGAATAACGGAAAATGAGTTCTATGTTGGGTAAAATTTATTGTAGCCATTCATAAAAGTTGTTACAAAGAGAAAGTCGCAAAGCAGTGAGAAAGGGTGACGGTTGTTTTACAGATACAGATATCCTAGTTCCTAATTAGGGAAGAGCGTATTGGCAAGTTCTGGACCTCTTAAGGCATGGGTTGGAGCTAAGAGGTGTTTAGCGATACTGCTGTGTACTTGTCACGTGATAAACTGATTGATGTCGGCAAGGAAACGAGGATTACCTATGATGATTAAGCTTGAACTAATGCAATATGCAACAGAAAACAACTAGGATAATACGCCAAGATTGGGCACATTGTTGTTTGTCCAGGTCGAATCTCATTCACGATACTGTGTTCACTGGCAGTGAAGATTGGTGATCGTCTTATCGTCTCAGAAGAGCAACGCCAAAGATCAACGCGAAGTCCTCAGAACAAAGGGCCTGAAGTGTCAACAAACTGTTAATAGATCAAGTGATTTACGCGTTCATTTAGCCAAAAGGCTGCATTGACCTGCGTGAAAATGGCGAGAGCTTGGATAAGCACAGGGATTTTCACAGTCGCAATAATCCTGCTTGTCTTTGCAAACTGTGTAGAGATGAAGGGCAAGAGAGACCGCAAAAACCGTCGTAACAGAGATCATATTAAACTCAAAGAAAATCGCGGAAAAGTCGATCCTGTGAAAAGCTGGTTAGCATTTGTACAACAGTCTTCTCAGCGGCGTGGGCAAAATGTTGTGGAAAACAGACGGAGATCTCACAAGAAGTCAAAGAAAAACGCGCACAATGTACCTCAAGGACCCCCCGGACCACCTGGACCACAAGGACCCCCAGGCCCACCTGGTGCAGTTATTTCGGAGGCAGCCATGGTAGCAGAATTCAGAAATCTCGTAAGAAATACAGCAGATAGAAGGGCAGCAAGATTTGCAGGACAGCCCTTAGGACTAATGGCTGCCGGAGTCCCCGATGTGATATCTGCATTTTTCATCGTGCTAAAAAAAGACATTATTGTTCATAAGAAGTCAAAAAGAGAACTTAACCAATTTGAGGTGAGAGGGACAGGCACATTTATTCGAGGCACTGGTGTTCAGCTGGTTTCAGGGAGGTTTACAGCTCCATACACGGCAATTTACAGATTCCAAGCTAATCTACACATCGGTAGAGCCAAAGATGTCAGTTTAAAACCACGTGATGCTATTTCAGCAAAGGTTTGCATCAACAATGACTGTGATAACAACGTatcaCTAAAATTTCGCTCAGGACTATCGAGTAATGCGAGAATTTTCACAATCTACGTTGAAGGTTTACTATACCTGATGGCCAACCAGTATACTTCAGTTATTCTAATAAACCACTCCAGCAACATAGTGGTTGTCAACAGAGGGTCATCATTCAGCAGTTATTTGGTCGGTGCATAGCATTTATTCGATTCTAAAGAAGCGAATGGTATGAGtaatttgtaaaatcttgATCAAAGCTTGAAGGCACCATGGcagtttacaaaaaaagagtACCTGGGAATGTTGCTGCATCCTTGAAATTCGGTACAGGGGCAAGCAAGTCTGGCTGCTTCCATTCTGTCTGAAATAGGGTCAAAGATTGAGTAGTTAAAACTAATGTCGATGGAAACATCAAGAAGGCTGTAGGAGATGacagaaaagaaatatcaCTTGCGGATAACGTCCCTTTTTCCTACTGTGTTTTCAGAACGTTTGGATTGTTGGAATGATCCTCAATGGCAATTTTCTGCCTTTAAAAAGAACCATATGACTTATAAGGATATTTTAACTTTCAATTTGTGTCGGAACACTTGATCGTATTTGAAAAGCTTGACCTTCAGAATCTGAAGCTAATGATAAAATTTGGGACTGCTTAAAAAAATGGATCACCATTTCATCCAATTAAAAATAGGTGTATCGTCAAAATACATTGACCCTTTAACTGTTCACTTTCAGTTGTGTTGTACGATGTATGAAACTTTTCTGTTTATGCTAGACCATATGACACAAATTGGCCATTCAAAGACAGAAAtggttctttaaaaatctgtCATAGCAAACCACGACGAATTTATTACTTCATTGATGGATATTCAGATGTAAATAAGACAatcatttatgatttttttcaaatttgtaaagaTTCTTAGGTATCAAATCTTGCAAGGctaaaatttgcttaaaaacaaaGTGTTATCGTTCCCTAATATAGAACGATAATTGATTCACTAAAACACGAAGATACTAATCTTTGATGTAAGACTAAAATAACATAAACTGTGATTTAATTATtgtgaaacttttaaaaagatatttttataaatatatagcTTCTTTAGCGTAgtattaatatattttatattctaaGTTGCAGAGAGATTACTAAAGTAAAAACTTAATTGTAATAGAAATTGTGATATGAAAAGTAGAGTATTTCTGTGTAAA

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003597 (this species only) · gene tree & orthology

Pfam domain

No Pfam domain signature was recorded for XP_065060922.1 in Rhopilema esculentum.

InterPro

InterPro term	Type	Description	Source
IPR008983 all species →	Homologous_superfamily	Tumour necrosis factor-like domain superfamily	Interproscan
IPR001073 all species →	Domain	C1q domain	Interproscan
IPR052136 all species →	Family	Adipolin/Erythroferrone-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24019 all species →	ADIPOLIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005179 all species →	Molecular Function	hormone activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065060922.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.