Gene detail

Detailed information of XP_065062964.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_448:8998025...9006123
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065206892.1

CATTGTTCACTTCTCAACAAACCGTACCAGCAGACCGTACCATTAGTGCAGAGGAAAGGTGCTGTCAAAAGTAAGAAGTAAACATGATGGGTGATTCAAATGTACTTGGCAAAACCCAACTTCAGAAGCTTTTAGAGCACAAGTATAGTGCGCAAGGCACATCAATAGCTGAGGTTTATCTACAGCCATTTTGGCGATATGTCGTGGAGTTTATGCCCCTTTGGTTGGCCCCAAACACAATAACAACATTGGGTCTGGCTGTCAACATTATAACATCGGCATTGATCATGTATATTTGTCCACTTGCTGTAGGCGAGATATGCCCTTCTGCACTGATTTGTTGCTGTGCTGGTTTGCTTATCTATCAAACTTTGGatgctattgatggaaaacAAGCAAGGCGAACTGGAAGTAGCTCTCCACTTGGAGAATTATTTGATCATGGATGTGATTCATTATCAGTTGTGTTTGTCTCTTTGGCGATGGCTTGTACTCTAAATCTTGGCAAATATCcacatttcttgtttttcttctttttcaataactcAGTCATATTCTACCTTGCACATTGGCAAACATATGTTACTGGAATACTTGTATTTGGAAGAGTTGATGTAACAGAGGTTCAGATACTTGGGTGTGGAGCATTTATACTAACTGCTATTTTTGGAGTCCAACTTTGGAGCTACGAGGTCACAATCCTTGGGGCAAACCTATCTTTAGCACAACTTGCTGTTATATTTGCAGCTTTAAACAGCTTTTACTACATGCTGAATTCATTCTCAAAAATCTTAGCTGGTGGAGTTGGTAAAAATAAATCTACTGTTTCTGATACCAGTGTTTTATCTCCAGCGATTCCCCTTGGCATTGTGTTGGCCTGTGCTTTCTATGTATATAAACATTCTGAACTGAATTTGTTCCAAACAGCACCATGCCTTGTAGATTTAATGTATGGTATAACCATTGCAAAGCTGACTTGTAAATTAGTGATTGCTACAATGACAAAACACCCATTGGAAATGATAGACAGCTGCATGCTTGGACCAGCTGCTCTGAGCTTCATCATTTACTTTTCTCTTCCAGTCTCTGAATGGCATGCTTTGCTTGCTGTGTTGgccTTTGAATGTCTTAATATGGCAATATTTTGTACCAAAGTTTGCGTAGAAATCAGCAGTTTTCTTGGCATCGACGTTTTCCATATCAAAGAGAAGAAAGCTCATTAGAAATAATGATCAGGTTTTGGAGCCGGTCACTCAAAATTCGTCTTTATGGAAACATTCTGCTggaaatatttgcatttatgtGAAATACAAACAGAAGTGAATGATACGTTTTATTCCCAATTGAGTTGATTTGCATTGtgaaataaattgtaaaattgattttaaacgCTTTGAGTTTGTTTAGGATTAAGCTGCTAGAGACAATATACCTAATGGGATATTTTGTATTCCAACATTAATAGGATTTTAGAATAGCCAATTTCCGCTAGGGTATTTTTTTCTACTGCTAGATAACTCGTTTTATTTAGAGCAGGGCTGTCAAGGTCAAACAAGCTCAATTACTAGAATTAAACTAGGCTCAACGCATTTGCAAAATGGAATAATTGTTCACTGAAAAATCCAAGCACGACTATGATTTCAAACATTGATTTATGATATCAGAGTTTTGTCActaattttgatagaaaattgtCTAAGGAGAAACTAATAAAGTAATAGCATTTAATTAagtaaatacaattttttacttctaCTCGAAAGACACACATAATTGTGTTAACTGTGTCGCACGAGTATTGAGTTTGACGTCCCTGCTTTAGAGCTGAAAGAAGGCTTATTGATGCTCTGCTgttttcgaatttttattgaaaatttagatattttttattttgcattcaatGGCAACCATTCACATTTGTGGCACTGAATCCGGCTCCGTGTGTTTAGAAAAGGAGAGAAGTTTAAGCAGATAAATTCTAAAGCCATAACCGTTTACACAAAATTAACTTCCCTTGTTTACTTCATTGATCAAAATCTTAACTGAGAAATTGACTTACATTGACCAAAAACGAGCAGAATACCAAAGCCATATTACAAGTAGAATGTCCCCGTTCTATTCACGTTATTTTAATCCTGCACTCCTGAGATTTCTACAGGCTACATTTATTATTAGCTATTGCATAGTTAGATTAATTTTAAAGCATTAACTAGGTTTtctcaaaagatttttaaatacttAAGAATCCTAGGAATTGTTTGAAGTCGGAGCAGTTGGCACTCCTGTGTAACATACCCGGTGAAAACCGTCCCCGGTTAGAAATTTCCCCGCCGGAATGTCCCCTTTGGAGCAATCGAATAATCCATGCCTTTTTCTACTTACCCGCGTTCCAAGCAAGTGGAAATGTTTTGTCCCAAGTATATCTTAAATTCCCTTTTTTGCACCATACCCCATCCCCTGCTAGCCAAAGACAAATTTTACTGCCTCTGCCGTTTTTGCCTGCCATTTCCCGTTAAGAAAAAGCTTGCTTGGCATGTCATGCAGGGATGTTATAATGCAAAAGACTGTAGCATCTAGTGCCTTTGAAGGATATTGAGTCATTTTGGAGACTTGAGACAGGCGAGCTATGCATGGTTACATTTGCATAAATTCACCTGCCTTGTCGCATTCTAGTGCGTAGATTTTTGCTTGCTTAGTACAGAAATCGGAGACTAATATTCGTTGCATCGCGGCCTTGACCCTTTCTACAGCGCACCATAAATTTTTGCGATTGTTTTCTTTGGATTTCTGTCTCCTGATTCCTGTTCACGCCGCCTGCATCTTTCCATTGGAATTTCAAGTGGTATAAAGTTTCTGTAATGCAACTTCTAAATTTGTCCATCAGCAgttattgtttataaagaaaattttaacaattacAATCAAGGTTTTATGCTTTGTTTGACGCGAATGGTGGCTTTGACTCATTTTACGCGGCTTTTAGAGTTTGCCCCCTCCCCTTACATTGTAACAGGTTCATTCTTCTATCACATGTAGCATCTGGGAATGTgcgttttatcaaaattaggCATACAAGTTACATAACACAACGTGCTGTTTTCACGCTTCTGgcacatttttaaaagtaatatATAACCTCTACTGTTTTGTTGCAAGATTAATAACAGTTGCTGTAGAGTCTTGTAGTTGATAATGTCTTTATTTAGTAAAGAATAATGTCGTTCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01066 all species →	CDP-OH_P_transf	CDP-alcohol phosphatidyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014472 all species →	Family	Choline/ethanolamine phosphotransferase	Interproscan
IPR000462 all species →	Family	CDP-alcohol phosphatidyltransferase	Interproscan
IPR048254 all species →	Conserved_site	CDP-alcohol phosphatidyltransferase, conserved site	Interproscan
IPR043130 all species →	Homologous_superfamily	CDP-alcohol phosphatidyltransferase, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10414 all species →	ETHANOLAMINEPHOSPHOTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004142 all species →	Molecular Function	diacylglycerol cholinephosphotransferase activity	Interproscan
GO:0004307 all species →	Molecular Function	ethanolaminephosphotransferase activity	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006646 all species →	Biological Process	phosphatidylethanolamine biosynthetic process	Interproscan
GO:0008654 all species →	Biological Process	phospholipid biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016780 all species →	Molecular Function	phosphotransferase activity, for other substituted phosphate groups	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065062964.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.