Gene detail

Detailed information of XP_065063284.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_448:7600549...7622791
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065207212.1

CACGAGTTGCCAAGGAAAATTGCGCACCTCCGAAACAGGGTCAGGTGACACAAAGCTCAATGTGATTGATGAATTCTGTTATTGTTAAATAGTATATCCCGTAGCATATTCAAGCAGGCCGAGATTGTGAATGACTCTCTAAACTAGGTTGTCAGTATCAGCGAGCAATATCAAGACGTGAGGAGCAACTTAGTTGCCGCATTTATTGCAGTAGCAATTACTTTGTCGTGAGAGTTGGATTACCCATTCAGATTGAAGAAGTGGAGATCAAACATTCGCCTGTTCAAGCGTGCAATACCGAAGAACGCAAACAACAGAATTTCAAGACGAATCGCCAGGAAGATCGTACGAATATGTGCAGAAAAGCAATGTTTTGCCAGTTAGCAGTGGTTTTTGTCTTTCTCTCTGTACATAATGTGACGTCGCAGAAGTCTACTAGTGCAGCTGAAGATTCAAGGACGCCTATGTGCAGAGGGgcatttgatatttatttcGTTCTAGACAGATCATCAAGCGTCAGCAGGAAGAATTTCCAAGTTCAAACCGTCAACTTCGTCCACAACATCACAGGTTTCTTCATCAGCCCAAAGATGATGATATCCTTGATTTCttttgcaacaacagcaaccaCCGATCTGGAGTTAACGGAAGACAGgCAACTCATAACCAATGGTTTGATCAACTTGCGGAGGAGAATCCCCGAAGGAAATACTTATTTGCATTTGGGACTTCGAAAGGCTATTGAACAGATCCAGAAACAAGATCGATCATCAGCCAGTGTTATCATTGTTTTGACTGATGGTGAAATCGCTCAGTATCGTGACAAAGCTATCCAGTCGgCAGTACATGCAAGACAACTTGGTGCTACAATCTACGCTGTAGGAGTTGACGATTATAAGAAAGAAGATCTTGAGGCAATTGCAAATAGGCCCGCAAAGGATTACATTTTCACTGCTGGTGGCTACGATTCACTGAAAAATCTCGTTACTTCAATTGTGGATAAGACATGCATTGAGATATTAGCTGCTGAGCCTACGCATATTTGTGCTGGAGagaaattcaaagtgtCCCTTACTGGTTATGGATTCACGAAAACCAACAATATTAGCAACGTCTTTTGCAGATTTcagcaaaatgaaacacaTTATCAAGTCACCAAGCCATCGAAAGTCACCTCGACTCATCTTATGTGCCCTTCTCCAGCCATTGATGAGCCTCACAGTTCTGTTGTCCTCCAAGTCTCAGTCAACGGGAAAACTTTCGTTTCAAGCAATGTGACTGTTACTGCTGTCAACTGCCAGAAAACGAAGTCTtcgaaaacagaaaaaagttaCGGAAAAGCCCTGCTGATTCTCTTTCTGGTTCTGCTCTTTCTATCCTTGGTCTTAATTTGGTGGTTTTGGAAGCTGTTGCCTTGTGTGAAGCCTGACCCGAGTCCCCCGTTCATTGACACAGACGATTCTGAGgcgaaaaagaagaaatggcCTACTGTTGATGCTTCGTTTTATGGTGGAGGTGGAGTCGGGGGCATGAAGCCTGTCAGGGTCAACTGGGGTGACAAAGGAGCCACAGAAGCTGGAAACAAGCTGGCAAAACCCGAGGATGCCAAAATTATCGTTGATTCGACATCAGAATGCGGGGATATGGGAGATGCAAAGCCGAACTGTTCCACAATAGCGAAAATCCAGCTTCTTGCTCTATGTGGTTTCTTCAAGGGGCTTTACAGCAGATTTGCTGCCCGAAGACCAATCAAGGGAGGCCTAAACaAGCTGTACACATCCAAGTCAGAAAACTATGAGCGTGCTAGGAGTGCACTCAGCTCAATCTCCAGCCAAACCGCCTAGAAAGCATCTTTCAACTCGACCTGATGTGTGCGAGCTGCTGCTTTTCGTGTTTAAGACATAGAGAAGGCTTTAGATCAAACGGAAGAGATAGAAAAGAACACGCAGAAGTGACAGACAGTTGTGATGCCCGCTAGTTAGTCTTTGAAAGGGCTGCTTGATGAGCTTTAGACTAAAATTTCACTTCTTATCAGAGTGAAAGTTTCATTTAAACCGTTTGCTAGAGATTAAGCGATTTTTGTATGTTCTAGGGTTACAAATTTCCCCAATTTATTCTCCCTACCGAATGTTCCCCCGCCCCTTTGTACACTGATTATGCTGAAAACTTTTAACACTTATCATATATTTGCAGTATTTTACTATTTGATAGCTATCTGAAGGCTTTTGTGAACATTTCCTCAACTTTTCTGATCGTCCCTCTCACTCCCATTTATGGATCTTTGTCACCCCTTATATACATTGCTCAAGCTTTAGGCTCCAACGAATAGAGCAGGGTACTGAATTCTGGGTCTCGTTTTTATGGTCCATATCGCAAAAATCGCACACCCTAACacaatgcaacaaaatattttcctgcctccaaagaaaaagacagTCTTTCTGCTCCAAGACATTGTCAATGACATTTTGCTTTAACATTAAGTGCTTGTTGCTTTAGTCCAAAAGGGGAATGATCCACACACACTGTCCTATAAATCATTTAGTACAACGACAACAATATCAAACTTAGAagttaaaaaagtctttttgtTGAAGGGAAAATTCCAGTCTTTGGTAAAAAAGGATCTACCCGAGTTCACTTAGTTACAACTTTCCCTTGTCAATCACTGCTTAATTAAGTTCTTTATTAAGacttaaaatattataatatcTGATGTACCCGTAAATCTTAAAGTACCTTGATAACTAGGATGTATTTGAAGAACATGCTTTGTAGAAGCacttatttgttttgaatacgtaaaatattcaaagtaaCGTTGTAAATTAAagtagataattttttgtcaaagatGTAACCTGTAAGATTTTCGCATTTTTAGAAtgtgtaaaaattttattaatttattagGCTTTCACTTTGTATATTGTTGTCagtttctgaatatttttttgcgTTTTATCATTACGTTTGTGTTTT

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004796 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05587 all species →	Anth_Ig	Anthrax receptor extracellular domain	Domain	Interproscan
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008400 all species →	Domain	Anthrax toxin receptor, extracellular domain	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16059 all species →	ANTHRAX TOXIN RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20909	ANTXR; anthrax toxin receptor	-	NOD-like receptor signaling pathway	ko04621	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.