Gene detail

Detailed information of XP_065064034.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_45:2821418...2842984
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065207962.1

GATCCGTCCCTAAAATTGGTCTTGTTCCAAGAAACCAAAAGAGGCTCCATGGAGGAGAGGTCAGAGGTCACATGAAGCGGAAATTCTGGCTCCTGTCCTGATTTCGTTAAAAAAGTCTGTCTGCTGACAATTTGTTACTTGAAAGCGAAGAAAATGGTCAGcatCGACAGACTAAACTGGATAACAAGTGTGCCTGTAGGTATCCCTGTATGCCTGCTTGGCATTCTGGGTAACCTCGTCTCCATTGGGGTATGGATGCGCTTTGTGCGGAAGAGGATCGGCAGCAGCCCATCAAGTGCTATATATTTCATCGCCCTGGGAATAGCTGATACGGGACTGTTGGTGTTCTTCCTATTGACTGATGGCTTTCCAAAGGCATTTGGATCATCCATGGCTAAGAGCTATGCTTTTGTATGGTTTCATGCTTATGTTGGTTTcccattatttttcttcttcatcgtGGCGAGCATATGGCTTCTTGTTGGAGTGACGATCAACCGACTGATAATGGTCCGGTTTCCGTTATTGgGCCGACGCCATTGCACCGTCAATCGAACTTGCATCGCCATTGGCTGTATCCTAGCtttttgctttattatcaattttcctCACTTCTTCAACTACGAGCCTATTCACAGCAAGCATTCTTCCAAAGCACGGATGATCCCCACTGCGTATTCCCAACAGGGTAGTGCAAAGAATTATGAATTTTGGGTGCATTGCATGTTTCTGGTTCTGGCTCCTTGGTTCTCCATAGCAGTGCTCAATGCATGGCTTGTGATCACGTTGCtttacaaaacaaaggaatttCAAGAACTCGAGCAGAATCAGGACAAGATCACCGAAAGACAGAAACAGGATCGGCAGATCACGAAGGTCTTACTCACCGTCACTTTTGCGTTTTTGATCTTATTAGCCTGGCAATGTGTGAACCAATGTTTCTTCATGCTTCAGTTTGGGAAAGAAGAAGGATCGCACCAATGGACATTTGTTCAGGAAACATATGCCTTTGCTAAACTCGGCGTGGTCCTAAATTCTTCGATCAATTGCATGCTGTACTGCTTCTCTGGATCAACCTTTAGGAAGGAGCTTCGTCGCTTAGTAACAAGAGCTGAGGATACAATTTCTAGACGTACTTCGACGCCAATGAAGACATAAGAAAGGAGCTTGCAGGACGAATAGGATTGCTGATTACAAGAATCTTTCTGTTGATCAAACTTTTCTTGGCCAGGAGTGATTTGTTTGTGATTTGTGTTTATATTTGTGATTTTGTAAGAGGCCACAACCCCCTGCTGTAAATTAACCAAAAACGCAGACATAGGTTCGCTCAAATAGAAAATGTTAGGCCCAGAAATAGATTGTTTTCTCTAATATGCTGCCCACATCGTTATTAGAGGTTCCATTCTGAATTCatagaaataatttattgaCATCAAAAACCATCAATTATTGTTACCATTTCAAGGCTCCCCTTGGGTTTTCAATTCCTGTCACAGAACAATAACACAGAATGACAATAATGTGTTGGTCTTTGGAGCCAGGTCAGTAAAAGGGGAGGATTAGAATAAGCTAATGTACCCATACCTATGAGGTATGGATGaacatttattttggaaaGGTTGATTTCCCATGCGTAGACtgattttgatataaattttgcattaactttcaaagttttgtaatATCTTAAGAGTGATGAATAAATTGTTATTGAAAGTCGTAGTCACGttgaaagaataaagaatattttgtaatttgtaatGCATCAAAGACGAGTTaaccaaattcaaaaattctaaaatagatttttgtgacgtcatcacttaagaactctatAAGAGGTCAAAGTTTAAAGGGGAAATAATTGCTACTCTGACGGTAAAGCCcctgatctataaaaaagactgaTTGAGcttcccattgttttaaaacaccaaagtttgaagccggttcaatttcaaaaggaaaagaaacgTGAGAGCTGCAATGCTGTGTATGAGTCctgaaaaataacaagacCAGAACAGCTGAAGACGTTGCTAGGACTGACACTTAAGGCCGTCTCCTCGCATGGGCTGTTCTGGGGCCCTCTACCCGGATGGCGACACTCTGGTCATAttagaagctcgatccagtcttttttatagatcagtgggTAGAGCCCACAGGCCGTTGTTTAATTAATGATTTGTTTAAGGATATTTTGTCAGAAGctcaaagttttattttgaatatatttataagttattatcaaacatttcatgTCATTTTTAATGCACAAAATATCTATAATTACGCTGAAATTTCATATgattataaattattttgatacaTATTTGATATTATCTGATATTAAATCAGTCGTTTATTGAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR052954 all species →	Family	GPCR_Ligand_Interaction	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46641 all species →	FMRFAMIDE RECEPTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08428	GPR139; G protein-coupled receptor 139	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.