Gene detail

Detailed information of XP_065064258.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_4:10769134...10781654
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065208186.1

ATAGGTGAGCTTTTCGTGGCCTAGGGATTATCTGCGGCTATTTATACACTGTTTCTCAAAAtgaagcaatattttctttcatttaaaagtaTCTTCAGAACTCATGCCAATGCAGTAGACTCTAGTTACTGTGTCACACAAAAAattagcttgaaaatttgcgATGGTTAACAGAGTATGACTGTAATTTTGCGTATTAAGATCAAAATTCTGGTTTATTTTAACTGGTAGAGTGTGACGGGAAGCGGAGTCGACTGCATTTCTCTATCTCTATGCGGTCCTCCTCTGATTCTGGCAAATCTTGATTTCAAGGCGGTCGGAGCAAATGTTTTGTAGAAGGCAGCGGGAAAACTTAGTTCTTTTAATCAGGCCAAATTTCAGCAATCAAGTTTCTGTAATGAAAATCACTTACAAGATGATAATGACAGggttatctttattttttctaaaagccaaagttttctttgttttaaggAGATTTACTTCCTAGTGGAAACACCTTAGTGTTATTGTTAGACCCCCGTATTTGCGCCTTCGTAGAGGTCGTTCTGACAATCAAAACATCCAGACGTGATTTCTGTCCGAAGATGTCGGACGTTGCAGTTCTTGTAGAAGAAGATGAGCTGGAAAGAGAGAAGATGAACGGTATGCTCATCAATGTTGCACCTTTGCATGGCATAGAGAATGTTGGATTTGAGAGTGAAGTATCTGAAAATGCATCGAAAGTTGGAGCAAGCAGGCAAGATACGGCCCGAAATGATGATGAGCAAACAGATTTCATCATGGCATTGTttgttgtcgtttttgatACACGACATGgAAACGAAATTGAATGGCATATACCAGACTGCATTGATCTTGAAGGGGTTGAATTTAAAGCATTGGTCAGTGGTTCACACACTGTCTCTCAAGATTTTGTGTATTTCAAACATAGAGGATTTTATGGAGTTAGCTGCTTTGGGAAAATGTCTGTTGCTAACGAAGAAGAAAGACATGCAAGAATGAAATCAGTTGGTGTTATTTGTAAAGATTACACATCACTACATGAACACATGTCATTTTTGGAAGAGCAAGTTAGGCAACAACTCACAAGACCAGCAAGTTACAAAGAGCTGGTTGATTATTATAATGAATTTCGACAGTGTCCTCATAAAAACAATACTACAGTGTTATTGGAAAGAAACCATTTACATGCTGTAGATGAACTGCCAATTTTAAAGATAACACATCCAGCTGGATGTTTTAgtcaatttataaaatattttggagagaaaatttttattctttggaAACTGATTTTGCTGCAAAGTAGGATTCTGTTTTTTGCACCTCCTCCTGCTGGGATATCGTCATATAGAGTTTATTGTACCTGTCTTCTTGGGAGTCACGCAGTCCCATTCGTAGCTGACTGGAATCCAAATCCACTTTTCTCAATTAATGTCACAGACATACCAATGCTGACTTCGAAAGAGCAGTATGTAGCATGTacaactgaaaaaatatttgagacCAAGACTGACGTTTATGATGCTTATGTTGacaatcaaaatttaaggCTGAGTGAACGGCTGGCTTTGATcggaaaaataaacaatggaGACAAGAAACGCTACCAACAGTTGTGTATGTACAGTGATGAAGAATTCGTGAGTGGAAAAGAAGTATATGATGATGAAACTTTATACACAAGATTCTTTGTAGAAGCAAACAACAGACTGTTCAAGGTATTATACGAAATTGCCAGTCACGAGGATCGAACTTTAACGGCTGAAGCAGTTTATGAAATGGGACTGGATCCATACGGTGATCGATTGTTTATAGCTCTTATTGTCGATCTATACGATATACACGTCATCTTACCAAATGTCTCCTGTTGTTGATAACTAACGGATATTCATAGTTATTCTCAACTATCATTTACTCATACACTCAGTGGCAGGTAGAGACACtctttgtcaaaatcaagAGATGTCAAATAGGGGATTTGTGTGACAAGtattggtaaatttttcatttgcagtcATTTGTCACCACAGTTTCAGTTTTAAAGCATAATACCGTTTTGTTCTCGACCTTTTCATGCCTGTTGTAGACAAACTAACTTTCCAAAATGACTTTTGTCTCTTTGCTGTCCTCTACCACTCCCCTGATCATGCACCTCAAATCCAATACCCTTTTGCATTGATGCAAAGTCTTCAATGTATTTTAGCAAGTTCAGTCACCTCCTAAAATGGTTGCAAGATTCTCTTTGAAGGGGCATTCATTTTCTTCCACCCTGTCTTATCGCAATTCTCGTAGCAATCGAATTTTAAACGCTATAAttgcaatcttttgaaatCTATGCTTTCAGAATAACCtgaatatttgtttgttagCTGCATAAGTCTGATATGATTAATATACAGTCGAACCCCGTTAAGTCGTGCCCTGAATAAGCCAAACTTTTGCTTAGTTGTGTAATTTCCTTATCCACCCCTCCCCCTTTGAAGCCCTgacttttttgtaaagttgaaACCTCGCCAACCCTTTTGGTATATTACACTAGTCCGAGGAATACCTTCCTTCTTTCTTagtgaaatatttctattcGCCTTGTCCTTTCTTAACCCCAGTGTAAAATACTGAACAGCCCTTTAGCACAATAATTCCATAGCCACAATTTATGTTTTGTACAAAGCCCTTGTAGTTATGTTTATGTATTTTAGAATTAAGTAATTTGGGTAGGTAGATGATAATTGCACGTTTTAAACGTAAATCATTGtctgaaaaattaatttgaataattttagtAAGTTTGTTTTACCGGtggttttaaatttcaatattgatAATAGGTTTTGGGTAATAATATTAAGTATTTTTGGCGTAAAGCTCGAAGTTGTGATGATGATTTCCAAACAATTATGTGAGGAGATTTATTGGcctttaaacatttatttttaatgtattcctttttatcatttggagctgaaaaaataacacaacGTTTTTCACAGAtataatgtttgaaatttttatgaagtttGGAAAAAGATGTAGAGTTTAAACGTATATACTGCTCTCAGCCAAACGTATTCGATAACTTGATCTTCTCGGCCGAAAATATCGCGTTAACTAGACGTAAataattttcaggaaaattaaACTTTACCAACACAAATCCTCTCGAGTTTTTATGCACACTTTTATGCAAGCACTTAATCGAATTTTCTGCATCTTAGAGACCACAGcatattataaattttagaGCATTCCTTTTGtatccttgcaaaaatttgtgcttttgaaataattttcgaaataaccgttcacaaaaatctctttTATTTTACCCCGCATAATATCAAATAGAAGCACGAAGTTTTCCCACGAATATTTATCGATCTTAGGGGAAGTAACTGATTTGTTTATGTATTTCTGTCGATTTTGAAGTATATTTATAAGTTAATATCTTTCAGATGTGAGTATTTACTTAATAAAGGGTTATTATCAACGTCTATTTTCAGTTGATTAATGTACTTTTCGctgaataaaataatttttgctattttgaaattaataagAGTCaacagaattttagaattgtttTTAGCTGTATGGTAGGCAATAATGCGATGGCTTTATCAAGCAGTCAAGCttcttatcttgaaaaatgtcgTTTTGAGTTGGGGAATGCTGTGGtgagaaaagtttaaaaagggAAGGCATTTATGTAAATGAAATGTTCGTTGATGTACTAAACAATCTTGAACTTTGTTGATAAGTAATAAATTGCAGTTAAGTAATGCATTCGTAATCATATTTCCTTTATGGAAGTTCACTGGAACTTATTTTGTATGCTCGCAAACGTACTTTCGGGAAACCCATATGAACCAGTAGCCATAGTTAATGAACCAGTAGTAAATACATGGTTAATATTTGTAATTATCCGATAAgaattatgaaatatttgttaatcGTTTTTAAAAGTctcttttatgaaaaattatctaaGAAACCACAATGAAGACAGAAGCAATGCTATGATGAATTCAAGCATCGATGTCGAAGCTACACCATCATAAAAGGCGATTCTGAAACGAgcaatgaagaattttttggtATCATATACCTCCTTTGCGGAAATGAAttgtttattcattgttttattCCCATGAGACAAAAAGTAATAAAAGTGGCACTGACGCACTTATGCAGCATGAAAACAAGTTGGAACAAGGATGCATTGTGAAAAATTGGTGCAAAACTCATGGTTGTGATAATGTCCTTATTGTTTTCGAGATACAACAAAGCAGTGCACAGAGAAATGCAAAGAAGTTTTTTGGGTGTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09804 all species →	DENND11	DENN domain-containing protein 11	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan
IPR018626 all species →	Family	Protein LCHN/Anr2	Interproscan
IPR051731 all species →	Family	DENND11/AVL9 guanine nucleotide exchange factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31017 all species →	LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065064258.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.