Gene detail

Detailed information of XP_065065658.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_558:10847772...10855064
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09783 all species →	Vac_ImportDeg	Vacuolar import and degradation protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018618 all species →	Family	Vacuolar import/degradation protein Vid24	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14534 all species →	VACUOLAR IMPORT AND DEGRADATION PROTEIN 24	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006623 all species →	Biological Process	protein targeting to vacuole	Interproscan
GO:0007039 all species →	Biological Process	protein catabolic process in the vacuole	Interproscan
GO:0034657 all species →	Cellular Component	GID complex	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0045721 all species →	Biological Process	negative regulation of gluconeogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23335	GID4; glucose-induced degradation protein 4	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.