Gene detail

Detailed information of XP_065065677.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_107:3904675...3943932
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC135691637

ATGTTTTGGAAGTTCCATCTCGGATCAAGTGGATTGGACACTCTGCTTGCCAAAGAGGATGTTACATTAAAGGAAGTTCTGGATGAAGAAGATGTTCTCCAAGAATGTAAAACTCAAAATTCAAAACTTATCGAATTTCTCAGCAAAGATGATGTTCTGCGAGATCTTCTAGATCTGGCCATAACAGAACCCCCGGAGGACGGAGATTTAAAGACTCAATTCAAATATCCAAATTTAGCATGTGAAGTGATATGTACAGATATAGATGCAATCATTGAAAAACTTGTTTGTGAGAAGAGCCTGTTGGAAAAGTTATGGGCTTTTCTAGATCAAGATCCGCCATTGAACCCTTTAATTGCCAGCTTCTTCGCAAAAATCGTTGGTTCAATATTAATGAAAAAAGGAACAGAGGTCTTTGAATATGTTAAAGAACATGACGTCATCGATAAACTGCTAAATCATTTGGAGGTTTCTGCTATGATGGAAGTCTTTGTCAAACTCATGTCCATTGTCGATTCAAGTGAAATGAAAACGAAAATGGAGAATCTGCTGGAGGAACAAGAGCTGGTCCAGAAGCTGATCATGCGACTTGGGCCTCAGTATTCGCACGAGATGCACAGCAACTCCTCAAACCTTCTAATTGAGCTGATACGAATGGGTAGAGAGGCTCCTTCGCAAGTTCCTGACCCCGAAGACCAAAGCGGACTGTTTAGTGTAGTAGAAAGGGAGGATGTGTTATCTGACCTCATAGACAGAATACTTTCTGATCGTGGCAGCCCTAATGCTGACTCGTCTCTCGTGAATGGCATGGATGTCCTGCTCTCTCTAATTGAATTTAAAAGACCAAACCCAGAAGGACTAGAAGAACTCTTCACACCTGTTAGCGCAGAAAAGATTGCACAAGGAATCCAGAGTGCCCTCAAAGCTTTAAAATCACGGTTAAAAGATTTCCACGCATTGTTAGTTGAACCGCCTCCGCAAAGCCCAATGCTGTCAACTGTAGGCACACTCGACCCACCGTTAGGAAGGGTTCGACTGCATGTCGCATGGTTGATATCAGCTTTAGTAGCCACCAGTTCTCCGGATGTAAATAGCGAATTAACAGAATTAGGAACCTTAAACGTTTTATTGGATCTATTTTTTGATTATCAGTGGAACAACTTTTTACATACCTACGTGGAGCACTGTATTAGTTCGATTTTATGTAGCAACACAGAAGATGAAAGCAACCCATTACTAACACATCTTTTATCCGATTGTTCCCTGATAACGAAGATTATAACCGCTTGGGAGGAGAATGAAGCACGGCAGTTACTTCCTGGCGGTCAGCGAAGGGGTTACATGGGACATTTGACTCGAATTGCAAACAGTTTAGCCGCAAATATGGAAAAAGGACCCAACTGCGAGTTACTGCAATCACTTTTCAACGATTTACCAGAAGAAGCACGATCCAGCTGGAAGGAACTCGTTGAAGGAGCCCTCAATGATGTAAACGTTAAGAATACCACACAGATGCAATTTAGCTCTCCAATGATGCATTCCTCTTCGGAAGATGATGATGATGGTACTTTCAAATCCGTGCCAATACTGCAATATGAAAATTCGTTACAACAGGCCTTTTCAAATTATCAGGTCCAGCAGATGTCAGCGGAGTTTATCGAGACCTTTGGTCATAATGAGGATGATCTTAATGAAATCGGCAAATCTGATAACCCGTTTGATGAAATTGGAAACGTCGATTTCTCAATTAATGCTAATGAAGAAACACCCGATGCGCAGTTGTTTGAAGCTGTTTGTAATGAAAAAATTCGCCAGTTCGATGATAGCGGAAGTGATGAAGAGTGTTTCGGGAGCTCGCAATGGGGAAATGATTCTATTGATGTTTGGGAAGAAAAAGAGCTGAAATACTCCCCCAAAGCAAATATGAAACGAAGACCTGCGGAGAGTAACAGTGACGAGTCTGATAACAGCAGCGATGAGTCAGCTAGTTCGAGCGACGAAGAGGCTGTGTTTGCAGACGAGGTCAAACGAAATAGCCCCTTAATCACTGCAAAATCTGAAAACAAGGACACAAAACAGACAGATGAGAATATGGATATTGAAGCAAGGTATTTCGCCTCAACTTTGCTCCAATCACTTCTAGAATGGACCGCTACTTTTGAAGGTGAAGCAGTTGCCATGGATACTTTAGATGCCGCCGCAGTTGGTTGGGTAGATTCGGAGGCGACCTCGGTTGTCGATGTTGCCGATGAACAAGGGTTCGCAGATTTCACGGATATCACGAAATTCTCGTGTGATGAAGATGCGGACAATGTAAAAGCCGGACCAGAGTCGCCTGTTGCCATGGATGAAGACAGCAGCGATGCATTTCGACTGGAATCATCGAAGAAAAGTGAAGACAAAGCTGAAAATGAAGATGATAAAATGGAGGAAGACGTATCCGAAGCGGAGAAACCTGATGACAAAACATCACCCAACAGCAAAGGTGACATTCCTAGGATCGAGACAACATTAAATCCAGAGACAGAAGACTCAAACGAGCCAAGCAAACAAATGGAGAAAGATGTCGAAAGCAACTCAGGAACAAAAGATGAAAACAAGCAATCAAACAGCAAAAATGTCAAAGTTGATGTTGTGGAGTCTGGTGACGATCCTATGCGTGTGACGTCACAAGTTGTAGGTGGCTTTGTTGTCATCGATGCCTCGGTCCCGGAAGTTGAGAAGGAGAATCGAAATGAGTTACCTGCAGCTAAACCGAACCAGGAAGTGATGTCATCAAAAAAAGAAGCCCATAGCCCATCTAAGAGTGGTGTTTCAGTTGTAACCGTGTCGAGCTGCTGTCTTAATTGGCGTTCTTTTTATTCCAATAACAGACAGGTTATCAATATAAGTTCTGATGGGACAGTCGAATCACCGCGATCACCACGATCACCGAAGAAATCAAAGTCACCAAGCAAGCCAAGGTCACCGAGATCACCGAGATCACTGAAATCAACGGAATCAAGTCAGAGACTTTCACCAAGGCAGCTAGATACGAAGAGTTCAGAAGTGTCAGAACAAAGTGAGGTAAACGCGGAAGCCACAACAAATGGACCTGTTTTGACACTAGAGGATAATGGAAATTCGGAAAATTCTGAAACGAGCAAAGATTCGTTGACCACGTCAAGATGTGAAAGCAGCAATGTTGAATCGTGA

Transcript

rna-XM_065209605.1

GTTCGCGCCACCGTTCTTCAATCATGGCTGTTGAATCCGACAATATATGCATCTTAAATTATTGATTATCCGAGAACAAGGCAGCGTTTTATTCCTAATTCGAAGATCATTCCTCGACAGCAAGACTGCTGATTTgtgcatttgtttttatgaattCGAATTTGCAGGTTGAAGGTTGTACAGTAGTCCATTGCGCGGCCTCTTCACATGTCGGAAGACCATGGTTGCCAGGAGTtgaaatttgatcaaaaatatcGTAATATTTCGACTCTGTTCCTTCTCTATATAGATTCTAACAATTAACAAAAGAGAACAGTGCGTGCTTGTTTGTTTGCTTTAATTTGATGCTGATGATGGAGTAATGGTTTGTTTCCAAGTCGACCCATTGATTTGTTTTCGGAGAGCAACTTCCCTTTGAATCTTGGGAAAATCGAAGGCGGAGTGAATTTTTTACATTGGAGCACGGTAGATCGCCCCGACGCGTggagattttcaaattatcaagaTATATATCAAGAATCAACACCATCAATATTGAAGAACTAAATCAGTATGTTTTGGAAGTTCCATCTCGGATCAAGTGGATTGGACACTCTGCTTGCCAAAGAGGATGTTACATTAAAGGAAGTTCTGGATGAAGAAGATGTTCTCCAAGAATGTAAAactcaaaattcaaaacttatcgaattTCTCAGCAAAGATGATGTTCTGCGAGATCTTCTAGATCTGGCCATAACAGAACCCCCGGAGGACGGAGATTTAAAGACTCAATTCAAATATCCAAATTTAGCATGTGAAGTGATATGTACAGATATAGATGCAATCATTGAAAAACTTGTTTGTGAGAAGAGCCTGTTGGAAAAGTTATGGGCTTTTCTAGATCAAGATCCGCCATTGAACCCTTTAATTGCCAGCTTCTTCGCAAAAATCGTTGGTTcaatattaatgaaaaaaggaacagAGGTCTTTGAATATGTTAAAGAACATGACGTCATCGATAAACTGCTAAATCATTTGGAGGTTTCTGCTATGATGGAAGTCTTTGTCAAACTCATGTCCATTGTCGATTCAAGtgaaatgaaaacgaaaatggAGAATCTGCTGGAGGAACAAGAGCTGGTCCAGAAGCTGATCATGCGACTTGGGCCTCAGTATTCGCACGAGATGCACAGCAACTCCTCAAACCTTCTAATTGAGCTGATACGAATGGGTAGAGAGGCTCCTTCGCAAGTTCCTGACCCCGAAGACCAAAGCGGACTGTTTAGTGTAGTAGAAAGgGAGGATGTGTTATCTGACCTCATAGACAGAATACTTTCTGATCGTGGCAGCCCTAATGCTGACTCGTCTCTCGTGAATGGCATGGATGTCCTGCTCTCtctaattgaatttaaaagacCAAAccCAGAAGGACTAGAAGAACTCTTCACACCTGTTAGCGCAGAAAAGATTGCACAagGAATCCAGAGTGCCCTCAAAGCTTTAAAATCACGGTTAAAAGATTTCCACGCATTGTTAGTTGAACCGCCTCCGcaaagcCCAATGCTGTCAACTGTAGGCACACTCGACCCACCGTTAGGAAGGGTTCGACTGCATGTCGCATGGTTGATATCAGCTTTAGTAGCCACCAGTTCTCCGGATGTAAATAGCGAATTAACAGAATTAGGAACCTTAAACGTTTTATTGGATCTATTTTTTGATTATCAGTGGAACAACTTTTTACATACCTACGTGGAGCACTGTATTAGTTCGATTTTATGTAGCAACACAGAAGATGAAAGCAACCCATTACTAACACATcttTTATCCGATTGTTCCCTGATAACGAAGATTATAACCGCTTGGGAGGAGAATGAAGCACGGCAGTTACTTCCTGGCGGTCAGCGAAGGGGTTACATGGGACATTTGACTCGAATTGCAAACAGTTTAGCCGCAAATATGGAAAAAGGACCCAACTGCGAGTTACTGCAATCACTTTTCAACGATTTACCAGAAGAAGCACGATCCAGCTGGAAGGAACTCGTTGAAGGAGCCCTCAATGATGTAAACGTTAAGAATACCACACAGATGCAATTTAGCTCTCCAATGATGCATTCCTCTTCggaagatgatgatgatggtaCTTTCAAATCCGTGCCAATACTGCAATATGAAAATTCGTTACAACAGgccttttcaaattatcaggTCCAGCAGATGTCAGCGGAGTTTATCGAGACCTTTGGTCATAATGAGGATGATCTTAATGAAATCGGCAAATCTGATAACCCGTTTGATGAAATTGGAAACGTCGATTTCTCAATTAATGCTAATGAAGAAACACCCGATGCGCAGTTGTTTGAAGCTgtttgtaatgaaaaaattcgCCAGTTCGATGATAGCGGAAGTGATGAAGAGTGTTTCGGGAGCTCGCAATGGGGAAATGATTCTATTGATGTTTGGGAAGAAAAAGAGCTGAAATACTCCCCCAAAGCAAATATGAAACGAAGACCTGCGGAGAGTAACAGTGACGAGTCTGATAACAGCAGCGATGAGTCAGCTAGTTCGAGCGACGAAGAGGCTGTGTTTGCAGACGAGGTCAAACGAAATAGCCCCTTAATCACtgcaaaatctgaaaacaaGGACACAAAACAGACAGATGAGAATATGGATATTGAAGCAAGGTATTTCGCCTCAACTTTGCTCCAATCACTTCTAGAATGGACCGCTACTTTTGAAGGTGAAGCAGTTGCCATGGATACTTTAGATGCCGCCGCAGTTGGTTGGGTAGATTCGGAGGCGACCTCGGTTGTCGATGTTGCCGATGAACAAGGGTTCGCAGATTTCACGGATATCACGAAATTCTCGTGTGATGAAGATGCGGACAATGTAAAAGCCGGACCAGAGTCGCCTGTTGCCATGGATGAAGACAGCAGCGATGCATTTCGACTGGAATCATCGAAGAAAAGTGAAGacaaagctgaaaatgaagATGATAAAATGGAGGAAGACGTATCCGAAGCGGAGAAACCTGATGACAAAACATCACCCAACAGCAAAGGTGACATTCCTAGGATCGAGACAACATTAAATCCAGAGACAGAAGACTCAAACGAGCCAAGCAAACAAATGGAGAAAGATGTCGAAAGCAACTCAGgaacaaaagatgaaaacaagCAATCAAACAGCAAAAATGTCAAAGTTGATGTTGTGGAGTCTGGTGACGATCCTATGcgtgtgacgtcacaagttGTAGGTGGCTTTGTTGTCATCGATGCCTCGGTCCCGGAAGTTGAGAAGGAGAATCGAAATGAGTTACCTGCAGCTAAACCGAACCAGGAAGTGATGTCATCAAAAAAAGAAGCCCATAGCCCATCTAAGAGTGGTGTTTCAGTTGTAACCGTGTCGAGCTGCTGTCTTAATTGGCGTTCTTTTTATTCCAATAACAGACAGGTTATCAATATAAGTTCTGATGGGACAGTCGAATCACCGCGATCACCACGATCACCGAAGAAATCAAAGTCACCAAGCAAGCCAAGGTCACCGAGATCACCGAGATCACTGAAATCAACGGAATCAAGTCAGAGACTTTCACCAAGGCAGCTAGATACGAAGAGTTCAGAAGTGTCAGAACAAAGTGAGGTAAACGCGGAAGCCACAACAAATGGACCTGTTTTGACACTAGAGGATAATGGAAATTCGGAAAATTCTGAAACGAGCAAAGATTCGTTGACCACGTCAAGATGTGAAAGCAGCAATGTTGAATCGTGACGTCACGATCAGCTGTGGTAGATTTTTTCATATGCAGCTGAGGGCAGCAGTAGCCCTTTCTCCATACACAATCAAAACTAATCTTAAATGCGATTTGGGGCGTTAGTTAATTTGATAAGAATTATTCTCTGAGCATTTGACAGAGAGACTGTTGCTATGACAATTGACCCCGCCCATAACGAAGAAGTCAAGCCTTGAGGATTGTTGGAAAGTTTAACCATGAATACCAGAACGTTTGCAGTTGAGAGTGGAATGTATGCcaatctttggaaattttttcaataccCTTTTTAATGAGAACTTTGTTCATGCGAAATACGGTTTTTAGTAACCCATTTAGCATAATGTCCTTTAGATTAACTGGCTGTTGTATAAACACGAAAAGCTTAAAAACTGCGATGAGTAAGGTTGTGAACTGTTTGATGCTAGAGGTCTAACTTCCCAAAAATTGTGTGAGTTACAAGGTGCACTAGAAGGTAAACCTGCTTTTCCTTCCTTGCCATCTCGCCCTtctcctccccccccccttccctaTTCCCATTGCCTAAGAAGAAGCTTGGTTTCCACGCATAGGCTCTCAAACTGGCAGTAGGTTTAAATTTCTGGTAACTTCTATTAATCCACCCAAAGTATGTCATCAAAATCTTCCACTGAAGAACCAAAagttaatgttttcttttttgtgttcCAGAGCCTTCCTTAATCTCCTCTTACCAAGCTATGCTCACTAGTATTTTCCACTGTTAGATATCCCATGCCTTGGATATATCGAAGTGCCTGCAAGTTGCTTTACATTGCCGTTTAAGAGCTCGCAGTAAAATTTGAGTCAGACACGTACTGTGTCCTGCTTTGCAGTTTGAATATCTGTCTCTGCTCTTTTTGATCAGTTATTTAGAACTCTCACTCTAAATTTTCCAGATCGTAGACGTTTTAAGAAATGGCTTGTCATCCATTGCCACTCGTAATGTAGGGGTTAAGTAATCTTGTACGCTGTGTATCGCTAAGTTACGCCACGTCTACTATCGCGACTTCGCAAAGCATTTCACACGCAACACATATAGCCGTATCCTTGTAAAACCATGGGCTGTTCCTTTACCTTTATGCAAATGGCTTACATGTCTGcaactttttccaaaaattacGAGAATCTATCACCTTGATTTAATTCAagttttgtgtcatttttaCGAAGTTTTCTGTGTTTATGATGAAATGCTACAAAATTCTAATTCAAACAACCGACCAGTGAgttatttcttcattttgttcttaaattttcgTAATCTTAAAAATTCCAAACAATCGGATTAGAGTGCACTAGCGTTTGGAGCAGTGAATTGGGTTCTTTAAAGGCAACTATCAGATCCTCAAGTGGCTTGAGCCatctaccaatcaatatcaGCCTATCAATAGTATGatgctcactgattggtcaattgtTGATTGACAGGTTGCTGCAACCACTTTGGTGGCTGTCAACTGATTTTAAGCAGACGTATAGGGTAACCCTTGCTATTAATTGCAATCGAATCTCTTTTTCTGCCAGCCAGCCTAAATTGGCGCCTTTACAAGAGAGAAGCCTAAACCCTACTCCTCCTGTCTCTGTGTCATAAGCTGAAAGGTTTCTAATTAGTTGAGCTGCTTAATTCGtttgaaaccaatttttttaaccaatTTAATCTAGACTCTTTGGCAATTGTTGGGCTATTCCAGCTCTCTTTCTTTCCCACGAGATTCTTTATATGGAAATCATGTCTGTCGATTATaggatttttaaatttaaccTTCTTCCCCCTTCTGCCCCTCACTGGTATTTAgagtgccccccccccaaaaaaaataaagccGCCAAACATCAGCTTGTTACCCATATGCTCAGATTTCCTTCGTAACTACGTTAATGTTGGACCacctcaaaatttgaaccctAAAAATGGCTCattaaatgaagaaatattgCCAGCTAGACTGAATGAGATGAACCTGACGGCTGTGAGTATTGCCGTTCTGCCTATTGAAGCTTCTAAGCGTAATGAATAACTATGGCCGGGTTAGTGTTGGCGCATCTATCTGAATGCcttttattaatattttataaatctCAATTATCATGTTCTCCTTATAAAACCGCGCGGTGTATTAAAAGGTacaatttgcaaacattattGGTGTAAAACTCTCTTGTACTTTCTATCAGTGGCATTTAAGATGAAAATtgtgatttactgaatttaGGATAATAACCAACATCTGTCTTTGTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04499 all species →	SAPS	SIT4 phosphatase-associated protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007587 all species →	Family	SIT4 phosphatase-associated protein family	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12634 all species →	SIT4 YEAST -ASSOCIATING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019888 all species →	Molecular Function	protein phosphatase regulator activity	Interproscan
GO:0019903 all species →	Molecular Function	protein phosphatase binding	Interproscan
GO:0043666 all species →	Biological Process	obsolete regulation of phosphoprotein phosphatase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065065677.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.