Gene detail

Detailed information of XP_065065754.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_558:8305379...8309629
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065209682.1

GCACATCAAAGCCCGCATGTCTACCGGCGATCACTTCTACAACCTTTTGTTCTCATTCTGTTATTTGATTGGTGAAATGCAGTAGGAAATCCTCGTCGCGTGGTCCGAACAATAATCGGTCTATGATTGGCTTTTGTGTGACAATAGGAAGCCTTTGTAAATGGATAAACACAGCAGACTAGTTTAAAAGGAAATGAGATGGTGTGTTTTTAATACGTAGAAACAAGAGTTGACAACAGGATAGAGTTTTAGTTACCCTTTCTGACGAAATTACCAACCATACAGGCAAACTAACGGAGGTACCTTCGCTTACGTTCATGAGCAAAACAAGATGGAGTTAGAATTAAGAATTGCCATCGagtttatcatttcatttgctgtgaaaaagtttaaaCTGAAAAACACGGAAGAGTTTGTCGAGAGCCTAGTTGCATTACTTACGAAGAAATTTGAAGGACATTGGTACCCAGAACATCCCAACAAAGGAAGCGCATATCGTTGTATTTCTCTGTGTGATCAACTGGATAATATTCTTGTGAAAGCAGCCGAGGAAAGTGGCTTAGATGTTAGAATGTTGCAGTTAAGTTTACCTTCACGACTCGATGTCTGGATAGATCCACGGGAGGTTTCTTACAGAATAGGACAACATGGCTCTTTGACGCAAATTTATCGCGAAGGGGATGATTATGTGAATTCAATGTCAGAGTACGCAAAACCCGTTCTTGAAAAGAACAAGTATCTAAAAACAGACAACAGCATAACTGCGAAGCAGCCAGAAGAAGACAAGCCAGCTCATGTATCTGCAAGAAATAGCCCCAGTGATCGCGTGAAGGCAAGAGATCCAAACAGGCTCTCGCCAACTGCAAAGTCGTTTGTATCGAGAAGGTCACCCACGATTCCTGTGCATGTCCCGTACACGCAAACCGCTGTTACAACAGGATACCCGCCAAAACCAATCGCCAATGTTGATTACGCAAGAAAAGCATATTGGCAGCCGACACCGGTATATGCTCCTGTTGCAAGGATGCAAGCACATAATTACATGATTGCCCAAGAAATTGCACGCTTTGAAGCGCACTTAAAGGCACAGAGGATCGCCCTACACGCACAATACTACCAGACTCCATTTCAGTATATGAAGCACCTTCCCGGCTACTACCCGCTTTCTCAAGCAAAAGTTCCTACTCAAAGCAACAGTAGTCTGCGAGTTCAGGTTGTTGCATAAATTGCTATGTATTTTTCAGAAGAGGTACTCTGATTTAGTTTTACtgtgtaaataaatatatatgctTCATGGAGGCGGTCATAAATTTAGCATTAATTCAGATGTAAATTCAAATCCTGCTAGGTTTTGGTAACTGCTGCACGGCTATTCCCTGTGTTGATTGAAACTGGTTTAAAACTGAGATGAGATACATATTTGTAGATTTAGTAGACTATATGcaagcaaaagcaaaacagattcattaaaagctaaataaaataaaattaaattgacCGTTTTAGTTCAGATGCTCGTTTTTTGCTCGATTTAAAATATTCTAGTGAATTTAGTAAGGTAGGGTTAGGCCATGAAAATAGTCAATTCAGTATTTTCATTGAAGGTCAAATCCTCGATTCCTCTATCCAATGCATAAATTAGCTGTATATTGCTGTCACTGGTAACCGTTAATAAATGCATGCAAGATGAATAATATATTCATCAGCACTCTCAAAACCACAAATAAAACAGTGACGTGAGAAATCTTCATCTAAAAGTGCGATCGTGTTTTGTTAGAAACGTGGTTTTCTTAGAACAAACATATTGTCCATATAGCTCGATTCAGCTTATTTATCCCTTTCCATGTGACCTGATAAAGACGACTATCCTGCTCAGTTGAAGATGAATTGAATTTGCCTAATGATGGTCACGTCAATGTGGCgtgcaatttttgttttgctgaatttttaaGACCTGGCTCTCTGAAAACTGTGCAATTCCCCAAATTTCACAGCTCCTCTTTTGGAAACTGTTTTTAAGGTAGCATGCACCCCAACAACTCCTTCACCACATCCCCTGAATGACATTTTCGACTCAGTTTGATTCAAATTTCGTAAGGATAAGCCGTGTAGATATCACATGTTtaacatttgataaatattgtGAACACCTTGTATATGAATGTATAAATCACATATTACAACTTCAATGTAAAGCTAAACTCACAAGCTCATCGTTTTTTTATCGTCACGTATCTTAACTTTTCATGTAGATTAAAGACATTGATTTTACGAGAGCAAGACAGTATACTAACACAAATAGTTTAGCAatttaacattatttcatGTAACTTTATGACTGTTTCATCATTCACTTTATAATTCGACTGCTGAAGATAATATTTGTGATGCTTGCTAGGATGCAATTGTTAATTGAAAGggtaatttattttttggattttattgCTGCcgttttgtaaatttattctgtttgACTAAATAATCTTTAATGGagcattttattaaatttgtaATGATTTACTCGCATTGTAAGCTAAGTTAATTTCTATATGCAAATGTATAAACTATAATGGCTCACCTAAAGCAAAATGCTTATTATGTATCATTATTTTTACAGAAAGTTCTTGAAGTCCAGAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07742 all species →	BTG	BTG family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015676 all species →	Family	Tob1/2	Interproscan
IPR002087 all species →	Domain	Anti-proliferative protein	Interproscan
IPR036054 all species →	Homologous_superfamily	BTG-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17537 all species →	TRANSDUCER OF ERBB2 TOB	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0010468 all species →	Biological Process	regulation of gene expression	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14443	TOB; protein Tob/BTG	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.