Gene detail

Detailed information of XP_065065762.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_558:2881818...2889833
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065209690.1

CTCGTTCGAGACTCGTTTGAGTGAACTCAATGAAAGAACTTGAAACTTCTGGGACAGAGAAATACACCGAATCCTTTCTGCTGTTGGAGATGCTTCCTTTAATAGTTTTTGTTGTTCCTTGCTTCGTGTTATGGTggttgaagaaaacaattttcaagccACGTAAAGTTTTCGATGTTAAAGACAAAGTTGTCCTTATAACTGGTGCTTCCTCAGGTCTGGGAAAAGCATGTGCATACAGATTTGCTGAAGCTGGTGCAAAGCTGATATTATCAGCAAGAAATGTGGAGAAGCTCGAGGAAGTGAAAGACAGCATCATTAAAAGATACAGCCTGgattCTGCACTTGGGCCAAAGGTCATACCAATTGATCTGAGCGATTGTGAAAGCATAACAAAAGCTGCGGAACTGGCTCTCATGGCATATGGCCATATTGATATTCTCGTCAATAATGCTGGGATAAGTTGCAGAGGCAGCATAGTTCAAACTAAAATGGAAGTGCATAGGCAGCTGATGAATGTTAACTATTTTGGACCATTGCTTCTTACCAAATCTTTGCTACCGTCAatgattgaaagaaaagaaggtcACATTGTTGGAATAAGCACGGTTCAAGGAAAAATAGCAATTCCATTCAGGTCACCATACACTGCAAGCAAGCATGCATTCGATGCTTTCTTCACCTGTCTCAGATCCGAAGTTGCCAGCTCAAATATCAATGTTACTTTAATCAGCCCTGGGTACATTCGTACGAATTTGTCCATTAACGCACGGACATCGGATGGAACACAATATGGATCTCTCGATCCAACAACTGCCGCTGGGATGGAGCCAGGCCACGTTGCTGAGGAAATATTGAGCGCAGTGGAATGTTTACAGGAAGACGTGGTCATTGCTGACATGAAAGCAAATCTTGCTATCCTTTTGAAAACGCTTTGGCCATCGTTGCTAAGCAGAGTGATGAAAAAGAGAGCTCAAAAAGAGGAACAAAGTGAACTAGTCGTTACAAAGAATAAAACTGATTGAAACGTACGCTGATTATTGTAGAAATATTCACCTGTcgggaaggggggggggttgtatTTTAGGCAGAGCCCACAAGAGTAGCGTCCTTTCTGCGTTGAAATTCTTGAGCTCTGAAATTCTCTCTTTCtcagaaaaacaatgaaaacatgGTAGGGTTTTGctgttgacaatttttctttcctgcCTTACATTCgttagcctgcgtgcagactttgACCCTGTGACTGCAATGTTTTCTGGGCTCGGTTTATTAGCATGGGCAAATTGTTCCCAACATGACCATTTGATTgtctaaataaagcataaatgCGGTCCAAATAATAGTGAACTCTTCGGATTTCAGAGAAGAGGGTTGAGACATGCCCCCGTCACAATCCATTATCCCTGCTGTATTAGCCTGCGTTAAGActctgttgacaaaattgaaaataggagAAAAAGTAGAGTCTGCAAAGCCGAGCCGATTTTCTTGTTCACAGGTTCCTCAAAATCAAGGAACCGAATTTGATTAGTTGGGGgaatttcaattgctttttttcagttttcaaagtggCGCCTTCGAGCAGAAGTATAAATTAATGGTATCAAGTAATAGAATAGGtctgtttgttcttttgaacaactagaattacagaaaaacattgcacgctAATGGAGTTGTTGTTTTAGtgcttaaaataaaatgttgatgtcAGCGAACAAGAAAAGCGGCTCTGTTGCGCAGACTCTACTTTCTCTCAACTTTTAAATTTccgagtctgcacgcaggctatgCTGTATTAGCTCGTTCACTAACTAGTTTTAACCCCCCCTGACTAACTACCTTGTAGTAATTACCCCCGGTATTTTGAAGCAGCTTTTCGATTTTCGCTCAGAAATCGGCTCGTCCTTGTTGTTTATGTCTTAAAAACCGCTTTCATTCGTATGATGTTTTCAGCTTAAAAAGGCTTGTgtatattttgtgtttttgatttatatcaaataaagaaatttgttttgttccaTAGAATATTGGTCAGCGATAGGTTTTTGCTTTGTATGCATAAATGTGATGAATAATTGAAACACAGTAACAATTTGTTGGCTGTATAAAAAGTGTGGAAAAGGATTGTTCAAGTAACGATTGGTAAAAAGTAACAACTAGTGGCGCAAATAAGAGATAATTTTCAAGGGAAGGAGGACTGTGACGTCAAGGGGGGCATCTCTCGACGAGAAATGAAGCGACTCTTCTAAATTGATGCTTGCGAGCGTATGAGAAAATTATATCATTGGAAAAAAGCTTGACCTACTAATTTTCATTCTATTCATTTCTGACAGACTATTTCAATTAGTTGAAAACGTTACTCATTTGTATTATTTAGTGCCAGAGAGAAGTATGGCTTGGCAATAATTATTGATGTCTTGAACTGTAATTTAGCAAGTATTCAATGAATGAATGACAATAACGTTGCAATGAAATGTATTCTTATTCTAAAATTAAACTGggtaacaatttttttatctatgatCAAAAATTACGATGA

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000655 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00106 all species →	adh_short	short chain dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002347 all species →	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44196 all species →	DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11166	DHRS7B; dehydrogenase/reductase SDR family member 7B	EC:1.1.-.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.