Gene detail

Detailed information of XP_065066232.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_558:4433780...4466020
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC135692123

ATGATCCCAAGAGGTGGAGGAGGTTTGGAAGCAGGTTCGCCGAGGAAAGGTTGTGTTTCTGTAGCTATATCAAGAGTTGGTTTGTCAAATCAGCCATCCCGTATCAGCCTAACTGGTGACGAATTTGATGGTGTAAATGAACCAGAAGGAGCAAGAGCACAAGCTCTTGATGGTGCTTTCTTTGAAGCATTCTCGTCTGTTGATCAAAAGCAGAAAGGTCTGATAAAGAAGGCAAAGAAAGAATCCAAAAAACAGGCAGAGACACTCATTGAGAAGCAAGAAGCAGATACAAATTCTGTATTTTATCCCTTGTTTTCAAAGGATTCATTTACACTTAATCAGGCCAAGCTGATGTATGAAGAGCTGTTGTATGTAACAAGCCATCAACTTGGAAAAAGAAAGGTTGGAGCCAATGAAATAAGTCCTGGTGAACTAATAGTATATGGGCAAGAGGCCTTTGGTATCAGTAGAGATGACCATAAAAAGATTTACAAGAAGGTCAGGGATAGAAAGCCTCCAAGGACATTTGCCATCGTCACTGTCGTGGAAGCAAAAAATTTGGAGGCCAAGGATGCTAACGGTTTGAGTGATCCGTACTGCATGTTGGCAATCTTAAAAGATACTGAAGGGAGAAAGACGAGCAAAGATGGAAAAAGAAATAAAAAAATAGTCTTGCGAGAAATTCGCGATGAAGAAAGCGTGCAAATAAGCAAAATAAAAATGAACACATTGAATCCTGTGTGGCATGAGCAGTTTTCTCTCGAACTTCGTGACATCAAAAATGAGATCTTAAGAATCGACCTCTGGGATAAGGATGATTCGTCAGTGTTTCTGGATGAAGACAATCGAATAACAGCAATCAAGGGTTTCAGTGGCTTCAACAGGTTTCTGAAAGAAGTTGCACAGTCTACCAAATGTGATTTAAAGTCAATGGATGATTTCCTAGGTCTTGTCGAAGTCTACATGCGGGACATACCGACAGATGGGCTAGAGGAGGATTTTGATCTTGAACCAAGGACCCATAAGTCACATGTTCAAGGCACCTTGAAACTGAAAATAAGGCTCTCAGCTGATCAGGAAAACAGAGAGCCGATCGATGACGTCACTCTTTCTTCACCAATGAAATTCCAAAGGAGGCTACTCAAGCAGTTTTTGAGACACGATTATGACCAGTTCTTTAATTCAGGGGAGTTCAAGAACCAAGCTTGGAATATGCAGTTGTCCGACCATGCCACCTATCTACTAAAACAATTTACAATCCAAGGTTCTCTGACGCCCTACCAAGAATCTGTTGTAAAGCTTGAGGTGTATTCCAGTTGCATTCAAGATGTAGTTATACCAATGGAGCCACTTATAAGCTTGATCGAGTTTGTAAAAAGCTGTGGAAAGAAGAATGAATTGGATGAATATGAGACAGAACTTTTCATCAAATCAGTGGATGATTTTATCACATACTCGATGGCGTTAATAAGGAGGCACTGTTTGATTTTTCCGCCAACAGGACCAGACCAATGTCTTCGCCTCGGACAGCTACTTCTATGTATGCTGAATTTATACAAACTGCCCTTGTTTAAAACTACGTATCCGGATCGAAGGATATCACGTGAGCTTGAGAGTGAACTCAAGGCTGGCATGAAGGAATGGTATAGTCTGGCTATTGCTTATAATGAACCATTAGAGATGAGTGACCAAGCGAGGTTGGCCAGCCTTGTTGGAGTAACAAATTCTCTCACAGTCTTTCTAAACGCTGCGAAAAAGAAATATGTCCGATTATTTAAGCCCACGGGAGTCGATTACTATCCTTTGGTTTACACTGAGCTTGAAGCTTTGTTATCAGAAACCGTACAGCCAACTCTGCAGGATGTGTATGACCGTATGAAGTATGGACTGGAGTATCAAGACTATGGAACAGCTCTCTTTGAAGTTTATTTGTCTTTGAAGAATTTCAAAGAAAAGAAAGATGTTATACCTGAAGAGGACAGGATTGCAGGACCTATTGACTCTTACCACGAGTGGTTCAGAATTGCCATGACAAAGTGGCTGGATCTTGCAAAACTTAAAGCCATTAAGCGAATCAAAAAAGCTGTTGAATTAGACGAGGTCAGAGTTGTTCACTCCATGCTAAAGCACTCTGCATCTGCTGTTGATGTAACGTGCTGTTTAGGCCAGATCTGTGCCTTCTGGAATAAATTGGAATGGCCTGACATAGCTGGCTCATACGTTTTTCTTACACAAATCACCGATATTGTTGCATCCTGTGCGATGGAATACGCTGATATTGTTCTTGATCAGCTTGAAAAAGAAAGCTACTACGAAGGAAATGCTAACGAATTCGATGTGAAAGAAAAGCTTTGCCTTACAATGAATAACCTGGAACATGTCTTGCACTTCCTTGACTCCATACCGGACACGCTGAATTTTGAAGCATTACTGGCGGAGCTTGGCAAAGAGCATGGCGAAGGGAGATTGCAGAGCCTCAGAGAAACTCTCGATGACGTAATCAGCTGTGCTCAAGATGACATGCGACAAAAACTCGACCGCATAATTGTCAAAACTGGTGAACGTATGAAAGATGAAATAACGAAGTATCTACATGATATCTGCAAAAATGCTTTGAATGAAGATGACCCATATGAGCTAGCTCATGGTGTCCTGTCTTACATTGACCACAATCTTGTCACCCTGAATGAAAGCCTATTATTGCCAGCATTTAAAAGATGTTTGATCCATGTTTGGGAAGTTTTCTTGTTCAGCATGGAGGATGTTGTTAGAGATACGTCAAGGCGGGATCCCAAAGTATTTGCAATCCTACAAAAAGTTCTTCATATCGCACAAGATTTCTTCCAAGGTGGAGGCAACGGCATTGAAAACGAGCTCATCAGCTCGCACACTCTTCGGAGTATCGACCGCTTGCTATCACTGTATGCTTCTCCTTCTGCGGAAATCATTGAGAAGTATTATATTGAGAAATGCGAAGAACAGGCTAAAACTGATGACACTCTTGGAGCAATAAACTTCAAAATATTTTATTCGCAAGAGAATAAAGCATTGCATGTTGACGTGTTAAATGTCCGAGACTTACTGCCAATGGACAGCAACCAGCTAGCTGACCCATATGTTCAGCTCGAGCTGGTCCCTAAGCACATGTTCAAGGGGCAGGCAGAAAAGCGAACTCGAGTGCAACACGAGACGCGGTTTGCCATCTTTGATGAGAATTTTAGCTTCGAAGTCCCTGAGGAGACATGCAAAAAGCCTGGTGCCACTCTGTTGCTGACTGTTTACGACAGGGATCGTTTTCACGAGAACGACATCGCTGGCGAAGTTTTTGTTGACCTGTATCACACTCTTGGGTTAGAACAGAACATTTCTGGTGGATTCTGCGTCCTTCCACAAATAGAACTTCCACTCATCCACGGGTCTCTTATTGGGCAGCCATTTAAAGTGTTGATGGAAAGAAAGGATGCATTGGCAAGTAATTTCGTCAAGCTGAGAAAAGAAAAATTCAAGAAAATGGGGGATAGCCTGGCAAAATCAAAAGGAAGGCTAGCTCAATCGAAAAAATGA

Transcript

rna-XM_065210160.1

AATCCGATGTTTTGGCAACCTGTTTGagtttttaatttctgtttcTATTAGGAAGGCAACACATTGTGAAAGGAGATCAAATGAAACATGAGTAGGAGCATGCTACCGTGCTTTTCTCTTGCTGCATTTATTTCGACGTGAGGGGTTCGTTGAATGGAGTAAAGTTCATTGTAGAAGGACACTCGTAGAAAGATAAGAAATGATCCCAAGAGGTGGAGGAGGTTTGGAAGCAGGTTCGCCGAGGAAAGGTTGTGTTTCTGTAGCTATATCAAGAGTTGGTTTGTCAAATCAGCCATCCCGTATCAGCCTAACTGGTGACGAATTTGATGGTGTAAATGAACCAGAAGGAGCAAGAGCACAAGCTCTTGATGGTGCTTTCTTTGAAGCATTCTCGTCTGTTGATCAAAAGCAGAAAGGTCTGATAAAGAAGGCAAAGAAAGAATCCAAAAAACAGGCAGAGACACTCATTGAGAAGCAAGAAGCAGATACAAATTCTGTATTTTATCCCTTGTTTTCAAAGGATTCATTTACACTTAATCAGgCCAAGCTGATGTATGAAGAGCTGTTGTATGTAACAAGCCATCAACTTGGAAAAAGAAAGGTTGGAGCCAATGAAATAAGTCCTGGTGAACTAATAGTATATGGGCAAGAGGCCTTTGGTATCAGTAGAGATGACcataaaaagatttacaaGAAGGTCAGGGATAGAAAgCCTCCAAGGACATTTGCCATCGTCACTGTCGtggaagcaaaaaatttggagGCCAAGGATGCTAACGGTTTGAGTGATCCGTACTGCATGTTGGCAATCTTAAAAGATACTGAAGGGAGAAAGACGAGCAAAgatggaaaaagaaataaaaaaatagtcTTGCGAGAAATTCGCGATGAAGAAAGCGTgcaaataagcaaaataaaaatgaacacATTGAATCCTGTGTGGCATGAGCAGTTTTCTCTcgaACTTCGTGACATCAAAAATGAGATCTTAAGAATCGACCTCTGGGATAAGGATGATTCGTCAGTGTTTCTGGATGAAGACAATCGAATAACAGCAATCAAGGGTTTCAGTGGCTTCAACAGGTTTCTGAAAGAAGTTGCACAGTCTACCAAATGTGATTTAAAGTCAATGGATGATTTCCTAGGTCTTGTCGAAGTCTACATGCGGGACATACCGACAGATGGGCTAGAGGAGGATTTTGATCTTGAACCAAGGACCCATAAGTCACATGTTCAAGGCACcttgaaactgaaaataagGCTCTCAGCTGATCAGGAAAACAGAGAGCCGATCGATGACGTCACTCTTTCTTCACCAATGAAATTCCAAAGGAGGCTACTCAAGCAGTTTTTGAGACACGATTATGACCAGTTCTTTAATTCAGGGGAGTTCAAGAACCAAGCTTGGAATATGCAGTTGTCCGACCATGCCACCTATCTACTAAAACAATTTACAATCCAAGGTTCTCTGACGCCCTACCAAGAATCTGTTGTAAAGCTTGAGGTGTATTCCAGTTGCATTCAAGATGTAGTTATACCAATGGAGCCACTTATAAGCTTGATCGAGTTTGTAAAAAGCTGTGGAAAGAAGAATGAATTGGATGAATATGAGACAgaacttttcatcaaatcaGTGGATGATTTTATCACATACTCGATGGCGTTAATAAGGAGGCACTGTTTGATTTTTCCGCCAACAGGACCAGACCAATGTCTTCGCCTCGGACAGCTACTTCTATGTATGCTGAATTTATACAAACTGCCCTTGTTTAAAACTACGTATCCGGATCGAAGGATATCACGTGAGCTTGAGAGTGAACTCAAGGCTGGCATGAAGGAATGGTATAGTCTGGCTATTGCTTATAATGAACCATTAGAGATGagtGACCAAGCGAGGTTGGCCAGCCTTGTTGGAGTAACAAATTCTCTCACAGTCTTTCTAAACGCTGCGAAAAAGAAATATGTCCGATTATTTAAGCCCACGGGAGTCGATTACTATCCTTTGGTTTACACTGAGCTTGAAGCTTTGTTATCAGAAACCGTACAGCCAACTCTGCAGGATGTGTATGACCGTATGAAGTATGGACTGGAGTATCAAGACTATGGAACAGCTCTCTTTGAAGTTTATTTGTctttgaagaatttcaaagaaaagaaagatgttATACCTGAAGAGGACAGGATTGCAGGACCTATTGACTCTTACCACGAGTGGTTCAGAATTGCCATGACAAAGTGGCTGGATCTTGCAAAACTTAAAGCCATTAAGCGAATCAAAAAAGCTGTTGAATTAGACGAGGTCAGAGTTGTTCACTCCATGCTAAAGCACTCTGCATCTGCTGTTGATGTAACGTGCTGTTTAGGCCAGATCTGTGCCTTCTGGAATAAATTGGAATGGCCTGACATAGCTGGCTCATACGTTTTTCTTACACAAATCACCGATATTGTTGCATCCTGTGCGATGGAATACGCTGATATTGTTCTTGATCagcttgaaaaagaaagctaCTACGAAGGAAATGCTAACGAATTCGATGTGAAAGAAAAGCTTTGCCTTACAATGAATAACCTGGAACATGTCTTGCACTTCCTTGACTCCATACCGGACACGCTGAATTTTGAAGCATTACTGGCGGAGCTTGGCAAAGAGCATGGCGAAGGGAGATTGCAGAGCCTCAGAGAAACTCTCGATGACGTAATCAGCTGTGCTCAAGATGACATGCGACAAAAACTCGACCGCATAATTGTCAAAACTGGTGAACGTatgaaagatgaaataacGAAGTATCTACATGATATCTgcaaaaatgctttgaatGAAGATGACCCATATGAGCTAGCTCATGGTGTCCTGTCTTACATTGACCACAATCTTGTCACCCTGAATGAAAGCCTATTATTGCCAGCATTTAAAAGATGTTTGATCCATGTTTGGGAAGTTTTCTTGTTCAGCATGGAGGATGTTGTTAGAGATACGTCAAGgCGGGATCCCAAAGTATTTGCAATCCTACAAAAAGTTCTTCATATCGCACAAGATTTCTTCCAAGGTGGAGGCAACGGCATTGAAAACGAGCTCATCAGCTCGCACACTCTTCGGAGTATCGACCGCTTGCTATCACTGTATGCTTCTCCTTCTGCGGAAATCATTGAGAAGTATTATATTGAGAAATGCGAAGAACAGGCTAAAACTGATGACACTCTTGGAGcaataaacttcaaaatattttattcgCAAGAGAATAAAGCATTGCATGTTGACGtGTTAAATGTCCGAGACTTACTGCCAATGGACAGCAACCAGCTAGCTGACCCATATGTTCAGCTCGAGCTGGTCCCTAAGCACATGTTCAAGGGGCAGGCAGAAAAGCGAACTCGAGTGCAACACGAGACGCGGTTTGCCATCTTTGATGAGAATTTTAGCTTCGAAGTCCCTGAGGAGACATGCAAAAAGCCTGGTGCCACTCTGTTGCTGACTGTTTACGACAGGGATCGTTTTCACGAGAACGACATCGCTGGCGAAGTTTTTGTTGACCTGTATCACACTCTTGGGTTAGAACAGAACATTTCTGGTGGATTCTGCGTCCTTCCACAAATAGAACTTCCACTCATCCACGGGTCTCTTATTGGGCAGCCATTTAAAGTGTTGATGGAAAGAAAGGATGCATTGGCAAGTAATTTCGTCAAgctgagaaaagaaaaattcaagaaaatggGGGATAGCCTGGCAAAATCAAAAGGAAGGCTAGCTCaatcgaaaaaatgataaattgtaGAAACGCAACAGTTTAAACTGCACCCgattttgaagctaaaaagttatttttaagttGAATGTGTATGTTTGGGGGATGGAATCCTGCAATTCTTGGACGCGAAGTAAATAATATTCAGAATTCTCAGTATTTTAATCTcgctttaatttcttttattgaataagTTGTAAAATTTGCTATTAAGGAAATTTCTCTTCCTCGTCTATGTATTTAGTTTAAACTTAACAGTTATGTTGCCTTAACGTTAGATTCATGCAGAGGCAGCTAGAGTAACTGTCCTTTTTCAGGTTTAAGGGAGGACTGAAAAGATGCTGTGTGTTAAGTTGTTTTATTGATGCACGCTGGATTTATCCttatttatgcaaataaatgcaaatGGTAACTGTTGCTACCttggtatttttttatttcatttaggTAGCTGAATTGTTTTTGTGCTGGTAGTTAACAGCATAAAGTTTCAGCGACTTCCCTTAACATATAGCTGAAATGAGCTCGGTTTGATATGCAGTAGTTGTTTATTGTTGACGTTGCATCAACAGCAGTAGCTAAGAATATCAGTTCTAACGAAGCCAATCTCCTGTCGATTCTTGCAAGAAATATAACAGTAATCTAAATATTAATCGTTTGAGCAAGGGAAGCAATTAATCTTTGTAATCCTTTGCCAAGGCCTAGCCATGCCAGGTTTTGAATCAGTTCTATACTGGTTAACTATTCAATAGCCAACTCCATAAACTTCCCTGTATCATTCAGCATTTTTTACTGCTATGCTTTTCTTCTAAATTATCCTCCTAAATTGAATTTGTctagaatattttaaaatttattgaaaacccAAGTAGAAATCTGTCTGAATGAGCCATATATTTGtcatatgaaataatttgaaacaaaagaagaaaaatgacattcGTTCACGTTTTTGAGTAGAACAATTTAAATGTACCTTGGTGTGTCTGACTAAGAATTTGGTGATAGAGGGGCTCTTAAACAGATTTTCCTCAGCAAACTTTGATGACTTTAAGACTCATACTCAGGTACTTAGAAAGGACGAAAATGCAAGTTTTTTACATTAGATTGGTTATGCTATCCTTCTCTTAAGAAGTAGTTTAGAATTGTTAAATGATGTTAAAGATAGTGATGCAATTGTTGTTTCTGTAGGATTTAAGACATTTCATAGCCATCTTGAAGTTTGTCATTTCACGCCCGATATTACTGCTTATACTAGAGAACTAAAGAACAGGCTCGCACGaggttttttgttttcgttgACTCTTGCTTTTACAGAAACAAAGCCGATACTTTGTTCAGTTaatgcaacaacaacaacaacaacaacattatttaagtatttttcatgtatactaaatatttaaataatgtCCCATTATTGCTgcctttcctttcctttccattCATATTTGCGATTTCCCTCCCCTGGTCATGCTTTCTTTGACTCTGTGTGTCTCTCGTACCCAGGAAACAATGCATATCGATAAATTCACGAAAGTTATATTCCTACACGTTTACACCTAAATGACGTGATAACAGCGATGTTGTTACACCCGTTTAAACAATGGATGACGATCGCGTTCCAGATCCTGTCATTTTGCATTCACGTGACCTAAAAAGTCATTATGCATAGTAGTTATCATAATCAGGAATCTGAAGAAACACCTCTAAAAGGAAAGTTACAAAGAGCAAACAGGGGCAGTATAAGCAACAAAAACGAAGAGCAATTACAAATAGCAACATAAGCTACTCTTAGGTTTGGATTAACTTCGCTTGAACCCCAGTGTTATATAGTATCTTTTCCCCTAAAGCAATGATTAGGAAAACCAGAAAGGTGTTGAATCTAGTTACTATATACTACAGAATAATCCCTGTATAACGTTATTGGTTATAACATACTTTGGGATACAGCGTCCTTAATCGGCGGTCCCTAAAAGTGCGTTGTATCCGGATTACACTGTACATATTTGTATCAGCTTTAAACATTGAATACCCAGGGCCAGTTTAGATTATTAGAAATGGGATTGAATCTTTTAGAGTAATGATTGCGGCATAGGTGTTTACAGAGCACGCTTTCTCGGCATCCCAATCTCGATATTTACGCGCTTTTTgctcgtgtaaacggggttCTAGACACTTGAGTTCTCGATTAATCTCACAACCAGAGCTAGCTATCGTAAAGTCAGTTTGCTTAGAACAGGTGTATTTGTGTTCAAGTAGAAGCCCATACCGTAATGAACATTCAAAAGCAATCGGGTAGTGAATAAATGGTGTTTACGCAGGTGTGTGTTTGAATGCCGGATAGCAGCTGACCTGTATATTATTGTATTTGCACAGCAAACTTCGTCGCGGCAAAGCAGCTCATTAAGAGCCAAATGCAGTCAGTTTTGTactaaaataatttctttaatcaGGTTTGCTGGCTCTTAcgtattttcatttatcaagATGATTTGTTGCAGCAATCTCTAACATAACTTCTCTTTACATTGCAACTGTTGTAACAACTTTTAGCAATGTGGGATGAACGTCTTACAATTCTATCTGCAAAGCAGTCGGAGCTTAGAAGCCACGAAGAAGCAATTTTCATACAGGATTGTTCAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF06292 all species →	MUN	MUN domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR014772 all species →	Domain	Mammalian uncoordinated homology 13, domain 2	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR010439 all species →	Domain	MUN domain	Interproscan
IPR052095 all species →	Family	UNC-13 domain-containing protein	Interproscan
IPR014770 all species →	Domain	Munc13 homology 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45999 all species →	UNC-13-4A, ISOFORM B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0099503 all species →	Cellular Component	secretory vesicle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15621	BAIAP3; BAI1-associated protein 3	-	Transcriptional misregulation in cancer	ko05202	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.