Detailed information of XP_065066537.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_5:807089...830103
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08517
all species →
AXHAtaxin-1 and HBP1 module (AXH)FamilyInterproscan
PF00505
all species →
HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003652
all species →
DomainAtaxin, AXH domainInterproscan
IPR013087
all species →
DomainZinc finger C2H2-typeInterproscan
IPR009071
all species →
DomainHigh mobility group box domainInterproscan
IPR036910
all species →
Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR001711
all species →
DomainPhospholipase C, phosphatidylinositol-specific, Y domainInterproscan
IPR036236
all species →
Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR039655
all species →
FamilyHMG box-containing protein 1Interproscan
IPR036096
all species →
Homologous_superfamilyAtaxin, AXH domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15499
all species →
HMG BOX-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0004435
all species →
Molecular Functionphosphatidylinositol phospholipase C activityInterproscan
GO:0006629
all species →
Biological Processlipid metabolic processInterproscan
GO:0007165
all species →
Biological Processsignal transductionInterproscan
GO:0035556
all species →
Biological Processintracellular signal transductionInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_065066537.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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