Genomic Location: ScUbCFx_5:807089...830103
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families
| CDS |
| LOC135692380 |
| Transcript |
| rna-XM_065210465.1 |
| Protein |
| XP_065066537.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08517 all species → | AXH | Ataxin-1 and HBP1 module (AXH) | Family | Interproscan |
| PF00505 all species → | HMG_box | HMG (high mobility group) box | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003652 all species → | Domain | Ataxin, AXH domain | Interproscan |
| IPR013087 all species → | Domain | Zinc finger C2H2-type | Interproscan |
| IPR009071 all species → | Domain | High mobility group box domain | Interproscan |
| IPR036910 all species → | Homologous_superfamily | High mobility group box domain superfamily | Interproscan |
| IPR001711 all species → | Domain | Phospholipase C, phosphatidylinositol-specific, Y domain | Interproscan |
| IPR036236 all species → | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR039655 all species → | Family | HMG box-containing protein 1 | Interproscan |
| IPR036096 all species → | Homologous_superfamily | Ataxin, AXH domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15499 all species → | HMG BOX-CONTAINING PROTEIN 1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0004435 all species → | Molecular Function | phosphatidylinositol phospholipase C activity | Interproscan |
| GO:0006629 all species → | Biological Process | lipid metabolic process | Interproscan |
| GO:0007165 all species → | Biological Process | signal transduction | Interproscan |
| GO:0035556 all species → | Biological Process | intracellular signal transduction | Interproscan |
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
XP_065066537.1.