Gene detail

Detailed information of XP_065066613.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_5:5692665...5696488
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065210541.1

CATTTCTTTAAGGAGGAAAGTAAAGGAAGAATAACGGGAAGCATGTGTATTTCGTTTATTGTCAAGAATTCCGTTACattcagaataaaaaattaagaatacaGGTAAggtcaagaaagaaaataataaagtatttgaaatatgGTAAATCAAAGTATAAATAATCTtaattgagatttttcaaCACGCTATGGTTTGACATTGGCCATTTTGTATAAACGTATGCGGCACTCTGTTATGCAATTAGGCCTATGTGCTAACACAATTAAAAACTTGGGAAATAGGAAGTCCTGAATCAGTTTCATCGCTCAAGGGAAAAGCAAAATGGCCATTCATAGCTGTTATCCTAACATTGAAAGGTTTCACGGTAGCGACACTAGGGTGGTAGCTTGACAACAAGTGTAAACTTTGATATAGGTAAGACAATTTGATATAGGTGTGTTCATTTTTAGTTGTTCTCATAGCTGCCCAAGACGTGTTCATATTCAACGTGATACGTTGCCGAAAATCGCTGATCTCAAGGTAGACTCAGCAACTTGTTGTTACTAGCATGGAATTTATACTTATATCTCTAATGTTTATGTTGGCATTAGTGCAAGGTGCTATTGTTCCAGGAAACGCAGCCAAAAAGCCAGGGGAATGCCCTACACTACCAAATTTAGCCAATATCGAATGCCCGCTGCCTCCGAATGTCCACAACACGATCGAATTCAACAGCTATCTGATGACAATTGCGGGATGCCTTTTCGATGGGGACTGCCCTGGTGCAGAGAAGTGTTGTTTCGATGGCTGCAGAACAACATGCGCGAAAGCTAATATTGTTGaagtaatgaaaaatcaatCGAGAAGTTGCCCTGAAATTGAGAAAGCAAATGGCGATTGCAAATACGTAGATGACTCTGCTGCACTTCGAGAATGTCAGACGGGCGATGATTGCAGCAGTTCTGAGAATTGCTGTTACGACGGCTGTCGTAAAATATGCACAAGCATTAAAGAGCCGGAGAAATTAGTCGTAAAAGACGGTGTGTGCCCTCCAGTTGACGATTCAGAATGCGCTAGCCTACTTCTAGAGGAAGTGGACATCCTAGGAGGACGAATTTTGGAGCAAATTGAAGGTTGCAGTATGGACAGAGACTGTAATGACACAAAAAAATGCTGTTATAGCGGATGCCAACGAAAATGTATTGAGCCTTTTGTTGTAGAGAAAGTAgatcaaatcaaatataaagGTGAAATGGAGGAGAACCACAAGTCAAAGGATATAGAGAGTCAAGAAGCAAAGATCGTTGGAAAGGAACTGAGCACTGGATCAAAGATGAAAGCCAATAGGCTGCTGGAAAAGGAGAGAACTTTTGTTATGATCAAGCCAGATGCAGTGAAAAGAGGACTGATCTCTGACATActaaaaagatttgaaagaaaaggatATAAAATGGTCGCAATTAAATTAGCAAAGcCAAGCAGATTGCTGCTTCTTGAGCATTACATCCATCTAAAAGTGAAATCGATGCTGGAGGATATCCTGGAGTATGTTGGTTCTGGCCCTGTTGTTGTGATGATCTGGCAAGGCACTGGGGTTGTAGACGGGGCTAAAGCAATACTTGGTGCAAATGACCCCTTGACAGCAAAACCCGGAACAGTCAGAGGTGATTTCACTTTGCAAATTGGTAAAGATATTGTCTATAGCAgtgaaagtgaagaaaaagcTAGCCGTGAAATTGGACTGTGGTTTGGTAAAGATGAATTGGTGGATTGGTAGTCttaagattttgtaaaaatatttgtaagcAAAACAATTACAGTAAAATTCTAGACGGTGTATTTTGGGAATGGACATCAAGTTAATTGGAAATACCATAACAGGATAATTCAAATTCAAGCTTAATAATTTAACTGCCATCTACCATATAACGGTACTAAATTTCAGACTTGTAGTACTAgcaaaaataatctttcattTATAGGGcatgattttgtttgatttagGCTGCGTCTTGCTATTTCAGTGATCGCATACTCAGACTTTTAGTAAGAACTTGTGCAGATAGATTGATTTCTAACTAGTTTTCGAACTATGTTCAGACGTTTTATagtctgaagagtgtcagacgaaaagatTTAGTagcagtttcaaaatgtttgctttttcaaagcaatttttgtaattctgTACCAcgaaaagattgttttaatgaattgTTTCTGAAACTAACATTTGACGAACGAATGAATTCGTACAAGCATAACTTGTTCAACCAGTGTATTATCGAACATAGGCCGAGGACAGCACTACCAGCAAACAAAACTTGGCTTGCTAGCTTACTGTGTATCTCAAACCTAGCTAGAGTAATGAcaatcatttttctaaattagCTGTTGGacgattttctaaaattgagAGACGTGCAATCATAAACccgttttttgcaaaagaattgttttcttGTGAGTTTCTTATGAATAGTGGAAAGATTTACGAAGTTTGCAAATTAACAACTGTGACGAAAAGTTCTCTGTCTTATCCAGAAGTGGACATTTTATTAACTTCTCGGTCTATAAAGTCAATTTCTAACTTCTGAATATCAGAATAGTTTTGGCTTTGATTAAACGTATTATCAATACGATTTTTCACTTCCTGATTCaatacatattttcaaaactttcaatcatCAGTATCCATGCAGTATACAtacttttgtttgatttaGACTTCGTTTTGAATTAACATTGATGAATTTTTCTGACTTTTAGCAATGATAAAGACAACCTTTCATTTGGTAGAGATACTCTtgtatgcaaaattttattgaatttagGGTAGCTTCCTAAAACTTCGatgatcaaattttcaaactcttATCTGAAAAATAGAATCATATCACTCGATATCAGCTTAAGGCCTAGATGCTCGAGATAAGATCAAAAACCAATAACAATAGAAACAGTAATATGTAAGCCGATTAAATTCTTTTATACAAATGTATCAATATTTTGGTCACGATTTGATTCTCAGAATTACTAAAGTTTACCTCAATCATTTCCTTGGTTTCTTTCGGCGTTTCCAAAACTcctagaatgaaaaatattgaattcaAAAGCACGAGCCCTAATTTAGTTTTTACCGATATCGGtgtatcttttttcaatataacttatttgataatttccaaaagcgaattttcattttggttaTCATCAGAACATGTAAGgcttttctttcctttattgTTTGCAGCTTATCAGATCGTGTGAATATTATTTGTTATAAATCATTGAACTTAGGCCGTCCGCCTTGTTTGCCGGTTAAAGATCTTTCACTC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00095 all species →	WAP	WAP-type (Whey Acidic Protein) 'four-disulfide core'	Domain	Interproscan
PF00334 all species →	NDK	Nucleoside diphosphate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036850 all species →	Homologous_superfamily	Nucleoside diphosphate kinase-like domain superfamily	Interproscan
IPR008197 all species →	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR036645 all species →	Homologous_superfamily	Elafin-like superfamily	Interproscan
IPR034907 all species →	Domain	Nucleoside diphosphate kinase-like domain	Interproscan
IPR001564 all species →	Family	Nucleoside diphosphate kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11349 all species →	NUCLEOSIDE DIPHOSPHATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0030414 all species →	Molecular Function	peptidase inhibitor activity	Interproscan
GO:0004550 all species →	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0006183 all species →	Biological Process	GTP biosynthetic process	Interproscan
GO:0006228 all species →	Biological Process	UTP biosynthetic process	Interproscan
GO:0006241 all species →	Biological Process	CTP biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065066613.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.