Genomic Location: ScUbCFx_5:980038...995221
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families
| CDS |
| LOC135692614 |
| Transcript |
| rna-XM_065210808.1 |
| Protein |
| XP_065066880.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004614 (this species only) · gene tree & orthology |
| Ubiquitin family | UBD|ZnF|UBZ · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02037 all species → | SAP | SAP domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003034 all species → | Domain | SAP domain | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 all species → | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR039577 all species → | Family | E3 ubiquitin-protein ligase Rad18 | Interproscan |
| IPR006642 all species → | Domain | Rad18, zinc finger UBZ4-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14134 all species → | E3 UBIQUITIN-PROTEIN LIGASE RAD18 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003697 all species → | Molecular Function | single-stranded DNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006301 all species → | Biological Process | postreplication repair | Interproscan |
| GO:0006513 all species → | Biological Process | protein monoubiquitination | Interproscan |
| GO:0061630 all species → | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0097505 all species → | Cellular Component | Rad6-Rad18 complex | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
XP_065066880.1.
