Gene detail

Detailed information of XP_065067771.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_795:9233045...9265788
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC135693267

ATGTTTTCAGCTTTAAAGAAAAGACTGACAAGGCAGGATGATTCAAAGTTATCTCCATTTCCAAGTGGTGTTGGTGCAATTGGGCAAGCAATGCAAACCAAGTTTGCCAAAGGAGTGCAATATAACATGAAGATCATAATAAGAGGCGAAAGAAACACTGGGAAAAGTTGCTTATTAGCAAGGTTACAGGGAAAGCCATTCAACGAGGCCTACATTCCGACACAAGAAATTCAGGTTGCAAGCATCAACTGGAATTATAGAGGTGGTGATGATATTGTAAAAGTAGAAGTATGGGACATTGTAGATAAAGGGCAAAAAAAGAAAACCAATCAAAACACATTGAAGCTCACCAATGAATCGTCACAGGATGAAGGAGATGGCCCAGCTCTTGATGCTGAATTTATTGATGTTTACAAAGGAACACACGGTGTTATAATGGTAATGGACATCACAAAGCCATGGACTTGGAAGTACGTTGAACGAGAGCTTCCAAAAGTGCCAAATCACATACCCGTGCTTGTCATGGCTAATTTCAGAGATATGGGTGAACACCGTTTAGTTGATAGCGAAACGATGTGTGCTCACGTGGAACATATGGACAGACCGGTTGGATCTGCTGAAGTGAATTTTGTTGAATCGTCGTTGAAGAATGGATTTGGCCTACGATATCTTTACCAGTTTTTGAACATGCCATTCCTGATACTGCAGAGAGAGACACTTTTGAGACAACTCGAAGCCAATGCCCTTGAAATTGAGGAAACAAGGGAAATGCTCCTTCGAGATGAAGAGAAAGAAGAACAGAATTTTGATAAATTTACACAATCCTTGGCAAACCGGAGGGCAAAAACCGCAGGATCAGTTACCCCATCAAGCGAAACAGACGATACAGCATCAGAGGCATCCCCTAGCATTTCATCGAGCAGAAAGAGTGGAGCGGAAATGTCCCCTGCTGAACGCCCTGTGACGTCATTACCACCGCAGAATATCAGACAATCTGCTTTAACGACTGAAAATAAAGTGACTAACGACAGAAATTACTCTGCCAGGGTTGAAAAGCAGGAAGAGAAGTCATGTTTAGATGATGATGTTTTGTCACCAACATCTGCGAACAATATTCACGAGTTTAGTCCAGATACAGACTTAGATCCAAATTTCTTAGACGTTACCGAGAAAAAGAAGCGCTGGTGGAATAAGAAAGAAAGCAAGAAAAAGGAAGCTGAAGTTCCATCTCCAGCTGCGATTTCTGAAGACGAAAGTGACGATGAAGGTGGAAACCCGTTGGTTATGGACTATCAAGATTTAGACTCGGAAGACGAAAAACAATCAAACGAAGAATTAAATCCTGCTCCATCTAATAATATCGAAACAGACAGTGATAATGACCTTGACAATGTTAGTGATGATCATGACGTCACTCGCCCCATTGATCATAGTCAGAAGGGTAGTGATACGGAATCAGATAAAGAAAACCCTCTTGTTAGCGCCCCGGTCGATTTAGAGTCGTCAGATGACGAGATTACAAGCGAAAAGTTGGACCCACCAGAGCAAAACATTATTGACAAGCATAACAACGTTGGAAAAGAGATTGATTCTGGTACAAGACCTGGCACAAGAAAGAGTACAAAGAATCAACCAAAAAGGGTTAGTTCTGATGATAATTCAAGTAGTGATGAAGACGATGCTGGCCCAAAATACGAAGTCACCCCAGATTTTGACCTTGATGACGATGCAGGTTTGAATAATTGGCTCGGAGGTGATGATGGTGAAAAGAATAACAAGGAAGCAACGAGAGTTGTAGAGTCGAGTAAAAAGAAAACTCGCTCTTCCGATTCTTCCAGCAAAGATCCAAGTAAAGGGGATGAAAACATGGGCAAAGAAAGGGGCACAGAAACAGGCCAGTCCACAATTTCAATCACCGCAGATGATCTGGATATGTTTATGAATGAGCAGATGCGAAAAACGTCAATTTCACAGGAAAACGAAGAAACTGAGAAGAAAAAGACGCGGAGAAAGAAAGAGAAACAATCAGGGGAAGGGGAAAAGAAGAAAAAGAAAAAGTCTACAAAAGATCGGGAAAGTAAGGACGATAATGAACATGAAAAGAGAAAGAAGAAGTCAAAGGACAGGGAAGGAAAGAAAAAGAAGTCATCAAAACGGACAGAACAGAACAGAAGTGAATCAGAGCAGGATTATGAGTTGCTGTAA

Transcript

rna-XM_065211699.1

CTAAAGTTCTTTATCTATAGTTCCTATAGATTGTATATGTGTTTTGTGCTTTGTGTAGATATTGTATGTGTTTCACTCCTTCCCTGGAAGAAGGGTACTACTTTATTTTTCCAAGCAAGCGCATAATTTTCGTCTGACTATCAAAATCAGGATATTTTTGCTACCTTCATGTAATAGTGACGAGAAAATTCACCAATGTACAACttaattttgtacattttctATATTGACTTTGACACGTTTTACTTTCTCGAACTGTACTGTCTCCTAATACGCTCTAGCAGTGAAGTTTTTATACACTTGAAAGAGAGGCAGTGCCATAGCCATTTTATAGTGAATGAGCTGCGGGGGTAAGCCTTTGTTTTGTAAAGAGGAGGACAATAGTTTAtcatttaaaacaatggaaagtaACTGGGGCCggaggggcaattgccccctCCCCTAGTTAGCACGTTAAAGGCCCTAGGCTATGGATTCTAGGACGTCCCGATATTTTGAGACTGACTTTTTCTCATTATCTTTGCCGTTAAATCGAAAGATATCTAGTTGGATTGAAGTTCATCTAATTCTTTAGGATGACAGAAATTGGAAGGTGATTTGAATTCAGATCAGGGTATTAATCTCTTGTGGTAAATCTTAAAAGTTAGGTAATCGCTTAAAACGATATATTTCGTCAGGGACAGTATTAGACTTAACGCACGCTGTCGTCAACCGtggtttctttgttttgcaacCAACGCTACAAATTGCTTGTCTGACGCAATATCgattgctttgttttgatttgtacTTAGATCTATTTTAGCTTTAGAAAATTACgtaatgtttggttttgttttgacCTGGTTTCCATGACCAGGGctatttagaaaattgtatAAATTGAGCGCAACTATCAGTAAAAGTTAGAGAGGGTTTGAGGTTGCCTCACGTAAGAATGTCATTCTGTGAgcataataatcatcataacCAACGAAAATTGATCAAGGAAAtgaacaatatttgaaatggaTGTCAGAGACAGTGCCAAAGTGACTTAAACTACTGCATTTATACATTAGCCAAAGGTTAATGTCTACGATGAATGGTCAAATCCAAATGCCAATGACCGAGACCAAGGATCAAGTCTAGAATTCATTGCAAAAGTTACTTTCTGGTCATGTAATAAATTTACGAATTTACGTGTCTGTTAGATTAACAGGCTACGTGCAAAGCTTTGTAAGCAAAGATGTATTTGTAGCTCTTAGCTTATTGCGGTATTTTTTATTGTCGACttctttcctttgtttctttcattgtGATCTTTTCTTGACCTCTAACTGTCAACTGATTTAATCTGTTGGATTTTGTGTACCAGAAATGAAAAGGAATGCAGGCTTTTGAGCGAGTGGAGCGTCGTAGTGTAACTGCTACCCTAAATACCACTCCGGAGTAAAAGTTACTCCGCTTCGATAGCAATCCGGTATAGTTGGCAAAATATAAGTTACCTTCCTAAATTAAgtagattttctaaaattttaggTTTAGTTCGCCAGCTTCGGAATTTCCCGTACTGAGCCCTTATGCGGAATCGTCTTTTTGCCTTATGCCCAATGGTATAGAACCGCCTTCGGCTTATACCGCATGAGTGATTTTGCCTCACTCGATGACAATATGACACTTCTATATCATTGACAGACAAGGTGCTCTTTGGACCTAAAAGAGGCTAAGAAACTCGTTCGCAGACCACTCATTTGCTGGACAAAAGAAAACTATGGCGTCTCACTAGGCCTTCAGTGAAGATAAGTGATTTATCGTAATGTTCCCGGTAAGGAGCAGTGAATTGATATATAGAGCTTGACTCTATTATTTTGTATTGCCATAGAGGACCTTCATTTGCTATAGTTGCGTAAGGTGGGAAAATATTAAGATCCTGTTGGCTAACCTTGGAACCGTAAAGCgaatttttgcagaatttgaaGGCTGTCGGCATTGAAACGAAAGAATAGCTGCAGCtttgaatagaaaagaaaCATGTTTTCAGCTTTAAAGAAAAGACTGACAAGGCAGGATGATTCAAAGTTATCTCCATTTCCAAGTGGTGTTGGTGCAATTGGGCAAGCAATGCAAACCAAGTTTGCCAAAGGAGTGCAATATAACAtGAAGATCATAATAAGAGGCGAAAGAAACACTGGGAAAAGTTGCTTATTAGCAAGGTTACAGGGAAAGCCATTCAACGAGGCCTACATTCCGACACAAGAAATTCAGgtTGCAAGCATCAACTGGAATTATAGAGGTGGTGATGATATTGTAAAAGTAGAAGTATGGGACATTGTAGATAAAGggcaaaaaaagaaaaccaatcaAAACACATTGAAGCTCACCAATGAATCGTCACAGGATGAAGGAGATGGCCCAGCTCTTGATGCTGAATTTATTGATGTTTACAAAGGAACACACGGTGTTATAATGGTAATGGACATCACAAAGCCATGGACTTGGAAGTACGTTGAACGAGAGCTTCCAAAAGTGCCAAATCACATACCCGTGCTTGTCATGGCTAATTTCAGAGATATGGGTGAACACCGTTTAGTTGATAGCGAAACGATGTGTGCTCACGTGGAACATATGGACAGacCGGTTGGATCTGCTGAAGTGAATTTTGTTGAATCGTCGTTGAAGAATGGATTTGGCCTACGATATCTTTACCAGTTTTTGAACATGCCATTCCTGATACTGCAGAGAGAGACACTTTTGAGACAACTCGAAGCCAATGCCCTTGAAATTGagGAAACAAGGGAAATGCTCCTTCGAgatgaagagaaagaagaacagAATTTTGATAAATTTACACAATCCTTGGCAAACCGGAGGGCAAAAACCGCAGGATCAGTTACCCCATCAAGCGAAACAGACGATACAGCATCAGAGGCATCCCCTAGCATTTCATCGAGCAGAAAGAGTGGAGCGGAAATGTCCCCTGCTGAACGCCCTGTGACGTCATTACCACCGCAGAATATCAGACAATCTGCTTTAACGACTGAAAATAAAGTGACTAACGACAGAAATTACTCTGCCAGGGTTGAAAAGCAGGAAGAGAAGTCATGTTTAGATGATGATGTTTTGTCACCAACATCTGCGAACAATATTCACGAGTTTAGTCCAGATACAGACTTAGATCCAAATTTCTTAGACGTTACCGAGAAAAAGAAGCGCTGGTGGaataagaaagaaagcaagaaaaaggaagCTGAAGTTCCATCTCCAGCTGCGATTTCTGAAGACGAAAGTGACGATGAAGGTGGAAACCCGTTGGTTATGGACTATCAAGATTTAGACTCGGAAGACGAAAAACAATCAAACGAAGAATTAAATCCTGCTCCATCTAATAATATCGAAACAGACAGTGATAATGACCTTGACAATGTTAGTGATGATCATGACGTCACTCGCCCCATTGATCATAGTCAGAAGGGTAGTGATACGGAATCAGATAAAGAAAACCCTCTTGTTAGCGCCCCGGTCGATTTAGAGTCGTCAGATGACGAGATTACAAGCGAAAAGTTGGACCCACCAGAGCAAAACATTATTGACAAGCATAACAACGTTGGAAAAGAGATTGATTCTGGTACAAGACCTGGCACAAGAAAGAGTACAAAGAATCAACCAAAAAGGGTTAGTTCTGATGATAATTCAAGTAGTGATGAAGACGATGCTGGCCCAAAATACGAAGTCACCCCAGATTTTGACCTTGATGACGATGCAGGTTTGAATAATTGGCTCGGAGGTGATGATGGTGAAAAGAATAACAAGGAAGCAACGAGAGTTGTAGAGTCGAGTAAAAAGAAAACTCGCTCTTCCGATTCTTCCAGCAAAGATCCAAGTAAAGGGGATGAAAACATGGGCAAAGAAAGGGGCACAGAAACAGGCCAGTCCACAATTTCAATCACCGCAGATGATCTGGATATGTTTATGAATGAGCAGATGCGAAAAACGTCAATTTCACAGGaaaacgAAGAAACTGAGAAGAAAAAGACGCggagaaagaaagagaaacaaTCAgGGGAAGgggaaaagaagaaaaagaaaaagtctaCAAAAGATCGGGAAAGTAAGGACGATAATGAACatgaaaagagaaagaagaagtCAAAGGACagggaaggaaagaaaaagaagtcATCAAAACGgacagaacagaacagaagTGAATCAGAGCAGGATTATGAGTTGCTGTAAAAAATCGTCGCTTTTACCCGAATTGAAATCGCgatcaaattgaaaatctgTATTTAGGAAGGGGTAAGCTGTTGAGGAATCGCTTGAAAGAAATTCATATTCAGCATGTACGCTTGAACACCGTACAATGGGGTTATGGAGGAAATATCATCCAAACTAATTCACCAGGGAATCTAAAAAATAAGATGGCGGGCAAATGGTAGAAAAGGCAGCTTTGAAAAGGGGTCACTGACAATACAGGTTATTTAGAGTGCGATGAgagaaaaatcagaaattaaGAGATAATTTAAAGTTCAAGAGTTACCAGGATAAAAAATATCACCACGggaaaattcttgcaacatCAACCCCCATTTGTGACAGAACGcattcatttataaaaagaGGATCACAATATGCTCCGTTGGGTAGGGAGGACCATAGTTAGCAAGGTACATTTATTGTTGACAAAGAGATATGCTACTATGCTGTATTTTTAGTTGGTCCAGTGCTTCTTAATGATGCTCCCAAGTGCGTCTGATACAAGAATAATACCACTTAGAATTGTTTCATCAAGCCTCGCCCTAGAGACTGCAAAGTAATATTTAATATGATGGTGATACGTAATAGATAAGCCAGTTTCTCGTGTGGTAGAAATCATTTGTGCGTTACAAGGTTTTTGTGCTGAATTTATTCAGAAGTTGCTGAAAATTAATAGCTTTATCTCCTATAGGAAAGTTTAGGCCTAAACATTACGCAGTGTAATCTTTTGGTGTTCAGGATCCAACATCAAGcttttccttgttttgtttaatgatGTTCTTAACTTTATATTGCTCAAAGATTTTTCAGCATATTAAAGATTTAGAGACAAAATCATGATGTAGATTTAGACTAGATAGTTTAGACTTTCTGATCGTATctcaaaagttatttttgtgtACTAAGCTAAAATGATAGAATATTTATATTGATAATCCCAATACGAATGCgaattcttcttttaaaatagtTATACGGCGTATCAAGGGTGGGTGAATGGATCTTTCCAGCTTCTATTCAGCTTCGTTTAAACATTTGATGGTAGTGTCTTTGTTTGAattaaatctttgaaatttg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR040385 all species →	Family	Rab-like protein 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14932 all species →	RAS GTPASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065067771.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.