Gene detail

Detailed information of XP_065067775.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_795:9214506...9225340
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14634 all species →	zf-RING_5	zinc-RING finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR042448 all species →	Family	E3 ubiquitin-protein ligase CCNB1IP1	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14305 all species →	E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000795 all species →	Cellular Component	synaptonemal complex	Interproscan
GO:0007131 all species →	Biological Process	reciprocal meiotic recombination	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10639	CCNB1IP1, HEI10; E3 ubiquitin-protein ligase CCNP1IP1	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.