Gene detail

Detailed information of XP_065068380.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_795:11896439...11918533
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC135693748

ATGTTTTTTGACGATGATGACGGAGATTTCAGTCCAACTCCTGCGGCTGGAGGATCAAAGTTGGCGTCTCTTTTTGGAATGGGCTCAGGCTCAAATGCTGGTAATGAATCACTGACATACACAGCACCGAAGCAACCCAAAGCAAAGGATGAGTCAAATGGAAAAACAGAAGCAAAATCTGCTCCAAGTCTTTTAAATGCAACTGCAGTTCATACTTTTAGATATGTGAATGGGCAGTATATGAAACAAGGAAAATTAGGAATTGCAGTTCTTGGCAACCATACAGATGTAGATTATAAAATTTTGATATATGTGAGCCAGAAGCAACCAGTTGCAGCAGCAAAAATTCATGCAAATTTCAACTACACTGCTCAAAAGAATAACTATGCAAGCTTCTATGATGACCAGTCACAAATGTGGTCCATTTGTTTTGATAATGCCTCTGTTGCAAGTGAATTTGGCAAATGGGTTGCACTTGCCAAGTTCAACTGTTCACCAGTTGGTCTGTTGAGCCAAGATCTTGTGGTTGGAGAAGGACAACCTATAGCAAAGGGTGACTCTGTAGAGCTACAGTATACAGGATATCTATATACCAATCAATCATTTGGCAAGATTTTCGAGTCAAACAGAGAAGGTGGTAAACTGTATAAGATGAAAGTGGGAAAAGGAAAAGTAATCAAGGGCTGGGAGGAAGGAATTCTTGGAATGAAAAAGGCTGGAAAAAGACTTCTTATCATTCCACCTGGCTTAGCTTATGGATCAAAGGCGATCGGGGACAGAATACCTCCGAATGCAACTCTTATATTTGAGATTGATGTCACAAGGGCGAAATTTGCGAACCCTGATCCAAATTTTGCAAGACAAGATTCCTCTTCGAGTGAAGGTACTACAAGCTCTGCATCCAGTACTCAGGCCACAAAATCAACATCAAGTAGCGACACAAAGCAAGAATTGCCAGTTATCAGTGATCAGAAAGTGTCTGAAAGAGAGGAGACGAGCTCAAAGAGTATCCCACATTCTGATTCAGCTAAATCGAATATTGAAGGGCAGGCTTCGTTACCTGGTGATCTCCATACCGACGAATCAAAAAGACGAACACATTCTCTGACCGAACAACTATCAAAGTCTTTAGAGAGGCCTAGCGGTAGAGCGGATTTGCTCGCTCGAATGTCAAAAATGGGAAAAGCAATGGTTGGCTCGCCGCAAGCCGCCTCTGGAGAGTGGGATCACGAGACTGTGGAGGTCACAACGGAAGCGCAAAATAACGAACAGCAGACTACAAAAGAGGAAACGAAAAAGCATGAGAACGAGACTCAATCTGAACCCACCCCAAAACCGGTATTGAAGCCTCGACCAGAACATGCAGCCTCGAATCCAAGGAACCCAAATGATAGCTACAGCCACCCACGCACTGGATCCCATCATCACGATTCAGCAAGCTACAGTGCTTCTCCGCATCAGCAGCTGAATCAACCTCTAGCGATTTACCAACAGCCACACCAAATGTATGGGGTACAACCGATGCCATTTATGCAGACGATGCCTCCAATGCAGACGATGCCTCCAATGCAGACGATGCCTCCTATGCAGACGATGCCTCAAATGCAGACGATGCCAACTAGTAGTGCGCAGTCTTCTAACGATTTAAATCTATTGATTTCTGAAAGCAAAATTCACCACGGCGAAATTAAGTCAGCAGTTACTAGGGTGACCGAAAGGGTCGATGACTTGATTCACAAGGTCGATCGATTAGAGAAAGTAAATTACAGGCAAGAGGTAGCTAAGCCAATGATAGCAAGTGGCAACGAAATGGAAGCATCTGTGCTCGCGTCCAATATCAACAGAATATTACAGGAAAATGAAAAATTGAAGAAGGAATGTACCGAAAAGACAAAGAAAATTGAGGGTTTAAACGAAAGAATTTCCGACATGTTACTGAAGAATCAGAGCTTCCTGGAGCGTAGCAATCAACTGATGGAGGAAAGAGCTGATTCAATTAAATCTAATGCAACACAAGCAATGACAAAAATCGGCACGCTGGAGCAAGAAAATATGTCCCTGACAACCCAAATTACGTCACTAAAAGCAGAGATATCCGGTCTTGTGGGGAGATGCGATGAAGCAAGCAACAAAGAGGACGAACTGAAGGCAAAAATACAAAGTTTGAAAGATGAAAGGGATTCTGCAAGAGAGAAACTAGAGTCTGCTAGTTCAAATGCTTCAGATCATAAAGATGAATTGGAACAGTTAAAAAATAAATATAAAGACGAGAAACAGGAGAAAAAGAAGCTAAAAAATAAATTAGATCATTTGGATGAAGAACTTCAGGAAATGAAGCAAGAAAAAGAAAGTCTCGAAAAGGCCGTGAATGAAAGAAAGAAAAAACAGCAGTCGGATCGAAAGAAATTCGAAGAAGAGGTTGAAGACCTGAAAAATTCGCACGAGGAAGAGCTGAATTCATTGAAGCAGCGTTATAAGAAAGGATCGTTAGAAAATGAAAAGATAGCAGCTTTGGAAGCGGAATTAGAGGCAAGGCATCAAGAGCATCTAAAAAAGGCTGTAAAGGATGTTGAAGAGAAATTAGAGGAAAAATGCCAAGAAGTTAGTGCCGATCGGGACAAACTGAGATTGGAGCATTCACACATGGCAGAAAAGCTGAGCAAGCTAACCTCACTTGAAGAAAGAAACAGTGAACTTGAAAGGCTTGTTGAAGATCTGGAAGCGGCTAAACAAGAGTCCTTCAATAAAGCAGATAACCAAGTAGAGGATCTGAAAAGGAAGCTAAAAAATCTTATGGAACAAAATGAATCTATAGAAAAAGACTCGTATGAGCGTGGATATCTTAAAGGAAAGTCTGAAATTCCATCCAAAAGCTCTGAAGATGTTGAAGATAATCAAGCGAATGTGGCAGAAGAGGTAAAGAAAGTCATGAACGCGGTTTTCTTCAAGCTGAAAGGCGAATTTGAGGCTGAGGAGAATTACACGGGGAAGCGTGTCATGGCAGAAATACTCCAGACGATCAGAGACGTCACATTGAAAATGACTGAAGATAGCAAAAGTCATGATGAGGATCAAAGTGAAGAAGACGAAAGTGAAGAGGAGGAATGTGCGGACGAAGAAAGTCAGGAAGAGAGTGAAGAGGAAGATATTGAAAAAGAAGAAAGTGAAAAAGAAAAAATTGAAAAGCCAGAACTTGAAGAGGTGGAGACTGAGAAAGAAGGTAGTGAAAAGGATGAGAGTGAGGAAGAAGATGAAGATGAGAATAACGAAGAATCTGAGACTAGGACAGCCGATGCTCATGATGATAAGAGCACCGAAAAAGGTGATAATGAGAAGAACGATGAAGAGGAGCATATGGATTCAGACACTGAAGAAGTTGAAGAAAAAGAAGATGTGGTTCTATTAACAAGTGAAAACGAGGGAGATGCAGAGAATGTGTCACAATTGGACGAAATTGGACAGGAAAACGTCGGTGATGCGGTACAACGGGAGAGCCAGTATTCAGACGATGAAGATTTAAGTGACGAGGAGGATAATATTGATGTAACTAGTACTGAGATTGAGGAGAATGTAGAAGAAGCCGCAAAAGCTTCTGGAAATGAAGAAGATAGCGAAGAGGGAGGTCAAGACCTTGACGAAACTCAGAGTGACAATGTTGATGATACAAAAACGAACACAGATGTCGCCATGACCAGCAACCTTGAGAGTGCTGAACAGGAAAGCAAGGAAGATGCAATTGATAGTAGTTCTGGAGACAATCAAACAGAAAGTCAAATCGAGCAGCTGGAAGATAAAGTAGAGAAGCCTTCAGCTGCTGATAATGGCGCCAAAAATGAGGTTATTGAGAGAAAAGATTCCAATACAAATGAAGGAGTCAGTAGCGTGCCAAAGAAAATTCCAGAATCGAGTTCAACTAGTTTGTTTGAAAATGACGATGATGATGATGATGAGGACTTCCTTACTTCAAACAAATCAAAGTCTGCTTCAAAGAAACCTGGCCCTTCCGCATTCAGTAGAAGCCCTCCGCCGTTGTTTGATGATGATGATGATGACACAAACTGGATTTAG

Transcript

rna-XM_065212308.1

ATTCAGACCGCGTCTAAGAAAGTGCAAGTTGAAAAGGGAGTCGTGAAGGGGAAGTCAAGTGACTTGCTAACGGCCAACTGGATAGATCCGATGACATTTGGCTGGAAAAAAggtagaaatgttttttgacGATGATGACGGAGATTTCAGTCCAACTCCTGCGGCTGGAGGATCAAAGTTGGCGTCTCTTTTTGGAATGGGCTCAGGCTCAAATGCTGGTAATGAATCACTGACATACACAGCACCGAAGCAACCCAAAGCAAAGGATGAGTCAAATGgaaaaacagaagcaaaatCTGCTCCAAGTCTTTTAAATGCAACTGCAGTTCATACTTTTAGATAtGTGAATGGGCAGTATATGAAACAAGGAAAATTAGGAATTGCAGTTCTTGGCAACCATACAGATGTAGATtataaaattttgatatatgtGAGCCAGAAGCAACCAGTTGCAGCAGCAAAAATTCATGCAAATTTCAACTACACTGCTCAAAAGAATAACTATGCAAGCTTCTATGATGACCAGTCACAAATGTGGTccatttgttttgataatgcCTCTGTTGCAAGTGAATTTGGCAAATGGGTTGCACTTGCCAAGTTCAACTGTTCACCAGTTGGTCTGTTGAGCCAAGATCTTGTGGTTGGAGAAGGACAACCTATAGCAAAGGGTGACTCTGTAGAGCTACAGTATACAGGATATCTATATACCAATCAATCATTTGGCAAGATTTTCGAGTCAAACAGAGAAGGTGGTAAACTGTATAAGATGAAAGTGGGAAAAGGAAAAGTAATCAAGGGCTGGGAGGAAGGAATTCTTGGAATGAAAAAGGCTGGAAAAAGACTTCTTATCATTCCACCTGGCTTAGCTTATGGATCAAAGGCGATCGGGGACAGAATACCTCCGAATGCAACTCTTATATTTGAGATTGATGTCACAAGGGCGAAATTTGCGAACCCTGATCCAAATTTTGCAAGACAAGATTCCTCTTCGAGTGAAGGTACTACAAGCTCTGCATCCAGTACTCAGGCCACAAAATCAACATCAAGTAGCGACACAAAGCAAGAATTGCCAGTTATCAGTGATCAGAAAGTGTCTGAAAGAGAGGAGACGAGCTCAAAGAGTATCCCACATTCTGATTCAGCTAAATCGAATATTGAAGGGCAGGCTTCGTTACCTGGtgaTCTCCATACCGACGAATCAAAAAGACGAACACATTCTCTGACCGAACAACTATCAAagTCTTTAGAGAGGCCTAGCGGTAGAGCGGATTTGCTCGCTCGAATGTCAAAAATGGGAAAAGCAATGGTTGGCTCGCCGCAAGCCGCCTCTGGAGAGTGGGATCACGAGACTGTGGAGGTCACAACGGAAGCGCAAAATAACGAACAGCAGACTACAAAAGAGGAAACGAAAAAGCATGAGAACGAGACTCAATCTGAACCCACCCCAAAACCGGTATTGAAGCCTCGACCAGAACATGCAGCCTCGAATCCAAGGAACCCAAATGATAGCTACAGCCACCCACGCACTGGATCCCATCATCACGATTCAGCAAGCTACAGTGCTTCTCCGCATCAGCAGCTGAATCAACCTCTAGCGATTTACCAACAGCCACACCAAATGTATGGGGTACAACCGATGCCATTTATGCAGACGATGCCTCCAATGCAGACGATGCCTCCAATGCAGACGATGCCTCCTATGCAGACGATGCCTCAAATGCAGACGATGCCAACTAGTAGTGCGCAGTCTTCTAACGATTTAAATCTATTGATTTCTGAAAGCAAAATTCACCACGGCGAAATTAAGTCAGCAGTTACTAGGGTGACCGAAAGGGTCGATGACTTGATTCACAAGGTCGATCGATTAGAGAAAGTAAATTACAGGCAAGAGGTAGCTAAGCCAATGATAGCAAGTGGCAACGAAATGGAAGCATCTGTGCTCGCGTCCAATATCAACAGAATATTACAGgaaaatgaaaaattgaagaaggaATGTACcgaaaagacaaagaaaattgagGGTTTAAACGAAAGAATTTCCGACATGTTACTGAAGAATCAGAGCTTCCTGGAGCGTAGCAATCAACTGATGGAGGAAAGAGCTGATTCAATTAAATCTAATGCAACACAAGCAATGACAAAAATCGGCACGCTGGAGCAAGAAAATATGTCCCTGACAACCCAAATTACGTCACTAAAAGCAGAGATATCCGGTCTTGTGGGGAGATGCGATGAAGCAAGCAACAAAGAGGACGAACTGAAGgcaaaaatacaaagtttgAAAGATGAAAGGGATTCTGCAAGAGAGAAACTAGAGTCTGCTAGTTCAAATGCTTCagatCATAAAGATGAATTGGAacagttaaaaaataaatataaagacGAGAAAcaggagaaaaagaagctaaaaaataaattagatcATTTGGATGAAGAACTTCAGGAaatgaagcaagaaaaagaaagtctCGAAAAGGCCgtgaatgaaagaaagaaaaaacagcagTCGGATCGAAAGAAATTCGAAGAAGAGGTTGAAGACCTGAAAAATTCGCACGAGGAAGAGCTGAATTCATTGAAGCAGCGTTATAAGAAAGGATcgttagaaaatgaaaagATAGCAGCTTTGGAAGCGGAATTAGAGGCAAGGCATCAAGAGCATCTAAAAAAGGCTGTAAAGGATGTTGAAGAGAAATTAGAGGAAAAATGCCAAGAAGTTAGTGCCGATCGGGACAAACTGAGATTGGAGCATTCACACATGGCAGAAAAGCTGAGCAAGCTAACCTCActtgaagaaagaaacagTGAACTTGAAAGGCTTGTTGAAGATCTGGAAGCGGCTAAACAAGAGTCCTTCAATAAAGCAGATAACCAAGTAGAGGATCTGAAAAGGAAGCTAAAAAATCTTATGGAACAAAATGAATCTATAGAAAAAGACTCGTATGAGCGTGGATATCTTAAAGGAAAGTCTGAAATTCCATCCAAAAGCTCTGAAGATGTTGAAGATAATCAAGCGAATGTGGCAGAAGAGGTAAAGAAAGTCATGAACGCGGTTTTCTTCAAGCTGAAAGGCGAATTTGAGGCTGAGGAGAATTACACGGGGAAGCGTGTCATGGCAGAAATACTCCAGACGATCAGAGACGTCACATTGAAAATGACTGAAGATAGCAAAAGTCATGATGAGGATCAAAGTGAAGAAGACGAAAGTGAAGAGGAGGAATGTGCGGACGAAGAAAGTCAGGAAGAGAGTGAAGAGgaagatattgaaaaagaagaaagtgaaaaagaaaaaattgaaaagccaGAACTTGAAGAGGTGGAGACTGAGAAAGAAGGTAGTGAAAAGGATGAGAGTgaggaagaagatgaagatgaGAATAACGAAGAATCTGAGACTAGGACAGCCGATGCTCATGATGATAAGAGCACCGAAAAAGGTGATAATGAGAAGAACGATGAAGAGGAGCATATGGATTCAGACACTGaagaagttgaagaaaaagaagatgtGGTTCTATTAACAAGTGAAAACGAGGGAGATGCAGAGAATGTGTCACAATTGGACGAAATTGGACAGGAAAACGTCGGTGATGCGGTACAACGGGAGAGCCAGTATTCAGACGATGAAGATTTAAGTGACGAGGAGGATAATATTGATGTAACTAGTACTGAGATTGAGGAGAATGTAGAAGAAGCCGCAAAAGCTTCTGGAAATGAAGAAGATAGCGAAGAGGGAGGTCAAGACCTTGACGAAACTCAGAGTGACAATGTTGATGATACAAAAACGAACACAGATGTCGCCATGACCAGCAACCTTGAGAGTGCTGAACAGGAAAGCAAGGAAGATGCAATTGATAGTAGTTCTGGAGACAATCAAACAGAAAGTCAAATCGAGCAGCTGGAAGATAAAGTAGAGAAGCCTTCAGCTGCTGATAATGGCGCCAAAAATGAGGTTATTGAGAGAAAAGATTCCAATACAAATGAAGGAGTCAGTAGCGTGCCAAAGAAAATTCCAGAATCGAGTTCAACtagtttgtttgaaaatgacgatgatgatgatgatgaggaCTTCCTTACTTCAAACAAATCAAAGTCTGCTTCAAAGaaacCTGGCCCTTCCGCATTCAGTAGAAGCCCTCCGCCGTtgtttgatgatgatgatgatgacacAAACTGGATTTAGATAACACTATATGTAACTATAGAATCAGAATTCTTCGTTATATTCTCGCAAATCCACATCAAATATGGGTATGCTCTCTTTGACTGCCGGTTTTCAAGCCAGAGAGCAAAAACTCGACGACACGTTCACTGTTTCTGTAACAAATAATATTCGGCAATAATCTTACAAAAAGATGCCAAGATGCTGGTTCAAATCActtgtcctttttcaaaatttatcaatcaaGAGATTGTAAAACTAAAGGAATCCTTCTTTGATGTGGATGGCTTTATTGTTATAGTAATAgatatagaaaattaaaatgtacGTAATTGAAATAGCCGCTGTAAAAACGGGTAATTTTCTTAGAATCCAAGGCATAATTGTACATTGATCTTATAGTTTGTTtgtaaaactttctttgagAAGCAGATCCGATTTTTTATGTTCgtacatttctatttttgtatttcaatCTTAAAATTGATGTCTCTTTGAGCTCCCTGTGTGACAGATGCCTACTTACGATTCAATTCATGATGCTCTAAGGCATCTTGCTGTTGTTTCTAATTCTATCTTTcgaatgaaattgaatgctCACATTTAGGCTTTCGAATTATTCTCAACTCATTGGTTTAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00254 all species →	FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001179 all species →	Domain	FKBP-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR046357 all species →	Homologous_superfamily	Peptidyl-prolyl cis-trans isomerase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44927 all species →	FK506-BINDING PROTEIN 15	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003755 all species →	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17478	FKBP15, WAFL; FK506-binding protein 15	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.