Gene detail

Detailed information of XP_065068384.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_795:13687985...13691777
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065212312.1

CTAGGCTTTTCGCATTTTCATTCTACTTAGACTATTGGATTATTCTACCTCAAAATGTGTTGCCTCGCcattttttttgtaacaaCATCTTTGtgtaatgtttaaaaacacGAATCAATGATAGAACAGACCAACTGGGTTCATGCCAACATTTCACTGGCAGTTTTAGCGGCAGTGCGTGCAAGTCAATGCAAGATCAACCAGCGATGGTCCtgcatttttcacaaaaatacattacaaatgcaaataactgattttgaaaataaaaaaaataaaccccATAACCCTCACGTTGATGTTCAATAATCAAGGCGGACACTTGTGCATCACATAATGTGAGTGGCAGACCATAAAACACTTGAAAGATTATTATCAACACAGTAGTTATTGAACAATCAACATATTGCATGACGCTTACCATATTCACTTTGAAAATGATCCTCAAGCTCCAGCTGGAATTGTTTGTGtcgccattttaaaatttggcaCGCGatcaacaaaacaaaggaTGCCCCTCCTCAGCGACCATAGCCTTTTGGATCTTCAGGTTGCCCCTagccttttgttttcttagaAAGGCCAGGTTGGGCCGGAGAATTATTTCCGGTTTCGCTAGCACTAGCACTGGCAGCTAGggaaaaacaaccaaaagAGTGGTCCGGTGAACGCGAAACTGATGTTGCTGGCAAAATGGGgaagaagtttatttttctgttatctTTGTTGGTTACTTTATCAAATGAATTCAGGCAAGCACTAGGAGAAAAGGTTGATAACCTGTCATGTATTGGGGATGATGGTTCTGCAGTAGACTGGTTCATTGCATACAAGCTACCACGAAAGTCTGATGTCCCAGTAGAACGTGGTTATGGATATGCATACTTGGATGCCAAATCAAATGGCtttaaactttcaaacttCTCTGTTGCGGACACAAAAAGTGCCATGGGAGCGACCATGCAGCAAGTCTACTCGAATGCCAAAACACACGAAGATGACATGACATATGTTTTCTACAATGATGCAGACCCTGAAGgAAAGGAATATTCCTATCATGGTCATTCTAAAGGTGACTTTGCATTTGGTGAAAGCAGTGGATTTTGGCTGATTCACAGTGTCCCAAAGTATCCAAATTTCATTCATGATGGGTATGGTTATCCCCAAAGTGGAGCCTATTATGgacaaatgtttttgtgtgTTACCTTCAGTTCATCACAATTTGATTCTGTTGGAATGCAGTTGAGATATGCTGATCCTCATGTCCAGGATTCTAATCTTCCAAGATCACTGACTCATCAGTTCCCTAATATTAATGCTTTGCTACAAGATGATGTCATCACAGGGGTACCATATAGCCATACAGTGCGTCTTGTGTCAATTGCTGGCTCAGGATTTACTCATTTCTCAAAGAACAAGAATTTTGGGAAAGACTTGTACCATGAATTGGTTGCCCCATCCTTGAAGTGTAATCTTCTGACTGAAACATGGCAACATGGCTCAAGCAAAATCGGTCCATCGTGTGATGGTTTCACTGTAGAAGATATAACCAGAATAAAAGTTGATACAGAAGATAAGGAATTTGAATTTAGCAACTATGCTGACCATTCAAAGTTTGCTGTGGCAAAATCAGACAGTTTTTATGTTTGTATTGGAGATATCAACAGGATGGAAACCCAGTTCAAGAGGGGAGGTGGGACTCTTTGTACCAGCAACAAGTACATATGGAcacatttcaaaaaactagCAGAAGAGATCAACAGTTGTGACAGTGAATGGAATACAGAACCAGTTGTTATTCACCAATACCTTTAAACTTTCTGGATTAAATTGGATTTGTTTAgtacattttgttttatcatttaagCAGAAGAATcatattttaccaaaatgcATTAATGTTCCAgatatttaattgattttagatgTAGGGGATTGACTTAAGCAGTTATGTCAATCAAcaagcatattttttattttttcaaaatgccaaTTTAGGATTCAAAATCTCGATTTTTTATGCATGATTTcgcaaaaaaagatttctatgTGAGGCATGAAACATAAGTTTTCCTTCCGTTATGTAGTGAAAAGGCTTTAACTATCCTTGAAttcttgaatgaaattttgaatgataatttagaaattcTAAACCCATTGCATacttcctttataacagtgtactaattgagaaggaatacaatggacagctccccccccccccaatatgaattttgttccaaCAGCATTGTAGCCCCAAACATAGCCTGAAATGTTTATAGTGGAGTATTGAAATTGACccaattaataaaaaattaatgcatACTAAATTCAAGCAGAAGCATTATTTAGTTGACTGGAAGTCATAAAAAACCTTCAATTTCCTGAAATCGGACTTACATCCAAATGCAACTTGTTCACTTTCAACtctttaaaatcttaaaaaattctggTTTTGAGAAAGCATTTTGTTAACATATTGtgaataaaaatggaaaaatcatTCATTCTTACCAAGTTCCTTTTAAA

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010978 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03265 all species →	DNase_II	Deoxyribonuclease II	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004947 all species →	Family	Deoxyribonuclease II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10858 all species →	DEOXYRIBONUCLEASE II	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004531 all species →	Molecular Function	deoxyribonuclease II activity	Interproscan
GO:0006259 all species →	Biological Process	DNA metabolic process	Interproscan
GO:0006309 all species →	Biological Process	apoptotic DNA fragmentation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01158	DNASE2; deoxyribonuclease II	EC:3.1.22.1	Cytosolic DNA-sensing pathway	ko04623	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.