Gene detail

Detailed information of XP_065068677.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_795:10390966...10410859
NR annotation: no NCBI-NR hit recorded
Species abbreviation RESCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065212605.1

AAAACAATATGGTATCAAGCTGAAGgaCCAGAggaaaatgaaggtgctcctTAAAACAAGCCCCCAAATATCTCAAGATACTCTATTTCAAGCCTTTGAATAAAGTAAAGGGTGATTGATCAATTTAAAGAATGTCTGGGGAAGAAGAGCCGATGAATCCTTATCCCTCAAAAGAAAGGAGAAGAAGGCGTCACCATTCTGCTTCTGACGACAATAAGAATGCTGCCTCCAGCTCAGGTGCCCTCGTTCCTGGCTCTAGCAAAGACGGAATCAATCAGGAAaggagaaaagaaaatgggGCTCTTGGAAGTGATAAAGACTCAAGTATGCGGAAAAAAAGGGTTGGACGAAGGCAAACACCAGAGCCGGAATTATCCGAGGAGAGCAAAGAAAATGTAACTTTGGGAAGAAGTGAAAGAAGACGTCAAAGAAAACCGCAGAACGCCCAACGGATTCCTCGCTCTGTTAGTGAGGAGGTGTTGGCATTAGAGGGAAAGTTTCAACCACATATTGAATCTGAAGTCACCCAAAAAGTAGCCCAAGGAAAGAGAAGTCGCAGATCAAGGAGGAGAGACCCAGATAACCCAGATGATGCCAGCGAAGAGCCTATGGGCATTCCGGAGAACCAGGTCGTTGATCGCCAGCCTCCTAGACCAAGGATTCGGAATACGCAGCCAAAGAAGAAACGAAAGACAAGaaacGCTATGATGACGTCAGGAGATGAAGAAAACTACCAGGGAGACATGGATGGAGAAGTTTCTGAGGTTTTTAAGATCGACAAAGAGGACATCATACAAAGTGATGTCAGCCAGAGCACAGGCAAAATCGCACCAATAAATGCAACCAATTTGCCAAGTCAGCCACtggattttttgtttattgagaAACGAGATGGTCAAGGATTCATTAAAGAACACAAGGATAAAATTGATCGTGCCAACATGGAGCAGAACGTAGTAGATCATGACGTGTTACAGCTGGATGAGCGCGAAATATCCTCAATGGAGTTTGCTTTGCAAATCCATTCTGCATTTCGTATCATCGCTCTTATTTGTCATGGACTTCTAGCAGGTATTGGGTTGATACAGTGCGTCTTTGTTTACTCGTTAACTGACAATGGGTATGTGAATTTCTTGGAGAATTACCATGGCTTGGCGCAACCATTCCAAGCACTCTACTATTTTTTACTGGCTATCTGCACTGTCTCTGTTTTTGATAGGTATGTCAATATTGGAATCGGATGGAGTCAGTTCTTTCTAGCATTGCTTTCAAGACCGTCTCGCGCCCTTGCTATTGTAGgatatttgtttgctttggTGTTCTCTGTAAGTTTAGCGCAACTTGACGATAAAATCAGTTTGTATAAGGATGCCAAACAATTATGgACATCGACCAGTCAGATATCGACTTGGCGTGTTATCAATTTAGTGCGGGCAATTGGTGCTGTCCTGGGCTGGATATCAATTTCGTTAAACCCTCTGGATGATCTAGCAACCAAAAATATCAACGCAATCATAGAAcatgaaaaagatgaaataagaaacaatatcaaatcaaagtcTGGAACCTTGGCTAGCTGGGAACAACAAGGTGTTGCTTAAAACTTGAGCTGTAGATTTATAGATGAGGGTTAGCCTGTTGTTGGTACAGATTCTGTGAGATCGTATCGATCCTTTGGAATATCATTTGGGGCATGCTTTGTCTTCAGTTTGGCTACTTTTGTATGGAATCTTGTATCAAGTTTAATCTTTAAATAATGTCTATCTATCTATACCGTTTCGCGCGCTGTGTTGTTACCTATCTCCGCGAGACACACCTAGACTATCAACAAAGAGTATAAAATAGTGACATAAAGTTGTTTAATTGTATTATGATTTGTGgcatttttgcacatttgttttatcaaaaagacGCGGGATTTGGGACTAAGAACGCGATTTGCTTCGTGGGAATTAAATATACTTTCCTTGCTTAGCATGACAACACGAgatgttttcattcaaaaactgaCATCTCATAAGCCGAACTTGTAGTAGGTCGCTTCCATTTCGGTAATAGTTTTTCCTATCCCTTCATGGacttgttttttgaattttcagaacaGGTTACGAAACGTTTGTTTAGTCTAAAGGCCACATTGTATCATTGAGTGCCCGAGGAAATCAATACGCAAAATTTCCCCATATTTTTCGTGTATTCGGTAtatacaatgcctgccaaaagtccttggaaTACCTTGAGATTTCTGTGAATTCACGTGTCGCATCGCATGCTATTTTCATGTCAACAAGGAGGGTGTTGCCCCCCTTCCCCTCATACAATGTTGATTAGTTAGCTGAAAGCCatagctttgtaaaaatgtatcacTTGTACATGTAGGATTATTAACATTTCCGTGGCACAACATTGTATAAGGGGAGAGGGGATGTTGCAGCTCATGTACAACGTAAATTATGGTCAGttttccaagacttttggcaggcattgtagacACACTGTAGTGTATCAAATGTATTGGAGTCAAGGTCAGTCGGTTTTTCGGGATCTAGGAATACTAAGGAAATCTTCCTAATTCTTTAAGCAAACATAATGGcgtcttattttgtaaattgtgTTGATAAACTTTTCTCGTAAATTCTCCTTTATCTCTCTTTCAAGCTAAGAGTATTAGGGTTGATTAAGATGTCGAAAGACTGTTTTACTTCCTTTTTGGATTATTAgttgcaattgaaaacaattgtaTGTAAATATACACTTGTGCCGATCGCTAAATGTGTTTTAGATATTATGTATAAAAAGGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15383 all species →	TMEM237	Transmembrane protein 237	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029409 all species →	Family	Transmembrane protein 237	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28388 all species →	TRANSMEMBRANE PROTEIN 237	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035869 all species →	Cellular Component	ciliary transition zone	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22765	TMEM237; transmembrane protein 237	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.