Gene detail

Detailed information of XP_065069290.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_92:11259846...11278674
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065213218.1

TGGATCTCAATTCAACTTTTGAGAATCACATTTAAATGCTTCACCATAGTTCATGCCTATGATTTTATGGGGCACTCGTTGTGCGGTACATTGGAAGTACCAACGAGGGGTTGCCGGAATACTCGCATCGCAAAAGAGCTAAACAAATTCAAGTAAAATGCTCCTGCGGCCCCTGGAGTGCAGGGGATGCAGGGGTGGTTGTGCCGCCCGTGGCGAGAGGCGATCGAAAATAATGCGGCCCGTAAACGCCTCATATTGATTTGGCTACGTGGGTTATAGAATATGGAATAAAATATATCCGCCTCTAAATACGATTTAATAACGCTTTAACCTACTCTTCAATTCCATTTATTGGGCTgacatcaaaacatttaattttgataaattttatgattGCATTCCAGATGATTTTATGTTGAAGATGGAAATAACTTACAGAAAGTTCTTCGTTTCGTTACTtgcataaatgttttctttcaacaaaaattttccacgttctcatcgaatttagaaacgaaatttgaaaaatatgtctgaaacttttttcacCGAAATTTTATCCACCCGAAATTTTTGACGCCGGATTTTTGTGTACTCATGGTATTGGAACCAGCCTCGCTATAGTTATTAAAGAGAGAGGCTGGTAACGTGAAGTGGATTGTTCCGAATGGGTGCCACGAGTTTTAGGCTCGTTCAAATATTGTGTTGCTGAAAAGActtaaaagtatttcaaatcGAACTTAACAGACAAGGAAATCACCAGAATTCTATGGTTGCGTACAAGAAACAGCCATTCGTACAACGTCAATTTGTAGAATATTCAGTATTAGGCCATCTATCGATCGGTGATTGAAGCCTGTTGTGAAAAACATGTCGAAATCAGTTCACTTAGCAACTCCACATGTTTTCCCCGGTGTTGGACTCAGATTTCTTAGAAGCGATGGATCGACTTCAGATGTTGCTTCTGGAAGCATCGTTGAAATTAGCTCCAAGGGACAGACAAATCTATTAGTTGTTCACAATGGGTCTGGAAAAACTCTTGTCAATGTACCCTTGCAAAGAGTATTAGATTGTTACAGAGTTGGGAAACTTTGCTTTTCGATCGGCCTGGACGAGCAGCCTGTCAtacttatttttgaaagtagTGAAGAGCTACAAAGGTTTGAAGATCTTTTCTATCTGGTTACTGGACATCCTAAACAGATGAAGTCAACATTTAATGAAAGGACAGAAGAGTCATCTGCTGCACAATATTTTCAGTTTTATGGTTATTTATCACAACAGCAAAACATGATGCAGGATTATACAAGGACGTCTACCTACCAAAGAGCAATTTTGCAGAACATCAGTGATTTTAAAGATAAGGTTGTTCTTGATGTTGGAGCTGGAACTGgtattctttcattctttgcTTTGCAAGCGGGTGCCAggaaaatttatgcagttgAAGCAAGCACAATGGCACAACATGCACAAACTTTGGTAGCGCATAACAATGCTTCTTCTGTTATTGAAGTAATCCCAGGAAAGATCGAGGagATCAGCCTACCCGAAGACGTCGATGTTATCATTAGCGAACCAATGGGGTACATGCTGTTTAACGAGAGAATGCTTGAAACATATCTTCATGGGAAGAAGTGGCTCAAACCTAATGGTAAGATGTTTCCGACAAGAGGGGACGTCCATATCGCCCCATTTACGGATGATGCTTTGTACATGGAGCACTTTGGAAAATCCAATTTTTGGTGTCAGAATTCATTCTATGGTGTTGACCTAACAAGTCTGCGGCAAGCGGCAACACAAGAATACTTTAAACAACCAATTGTGGACACATTCGATGTTCGCATACTGATGGCCAAGCCTTGTACCCATCATGTAGATTTTCTTAAATCAACTGAGAAAGACTTGGAAAGGATTCACATCCCTTTGCAATACACAATGCTGATGACAGGCACACTCCATGGACTTGCCTTTTGGTTTGATGTCGGATTTTTCGGTTCAACAGGTCATGTTTGGCTGTCAACTGCCCCGCAAGAACCATTAACTCACTGGTATCAGGTACGGTGTCTTCTTCCAAACCCAGTCTTCGTCAGAGCTGGCCAGAGGGTTAACGGCAGCGTTACATTAGTCGCAAATGAAAGGCAAAGTTATGACGTCGAAATGGAAGTAGTAGTGGAAGGAACTGGTGTTCGCGCAACCAACGTTTTGGACTTGAAGAATCCATTCTTCAGATATACTGGGATTCAAACTCCGGCACCCCCCGGAAATCATTCTCAAAGTCCTACGGATGCGTACTGGGGAAACGCAGGTGTGGTTCTGAATGGGGGCGTACTACCTAGCTCTGTTGGCTCCTTCGGAGTATCCCAGGGGTCTGGTAACTATACAGGGGGCGGACTCTTTGCCTATTCGTCCCAAGCAATTGGCAATGTCATGGCAACAGGCACTGGGTCCTATTCAAATCAGTCTCTTGCCTCGATCTCAAATTCAGGAGCGGCTGCAAGCACCCGTTACAATTCGTCAGGTAACTATGGAATGTACCAGGGAGGCTACCATCAGTGATCAATTGACGACCACAGTGATGCATCATTTATCATCAGTGGTTGATCggcaaagtttgtttttgttagaTTTTAACTGAATCGGATTCATCGAATAATCAAGTTTAATTTGTTAATATATCATGTTATGAATGGGACAGCCAGACCTGAAGTGTGCATTTGGatgatttcttgtttcaacAAGCAGCTTTGTAGATGCTGTCACCTTGTTTGTGGAAGGAATCATCTCGTTGCACAAACTTGCAGCCTTGCATTGACTGGAAATGATAGTCCCCAAATCAGCTCAGTTGTTGCACATATTTTGGGATTTATATTCTGAAACAATGTCTATCGATAGCTATTTACGTCATCAGATTGAAGGAGAGACCATCAAGAAATGAGCTGGATCTCTTACCAAACGATCtgtagattttgaaaattgctatGCCtatgtgttttattttctaaagaatttcaCTGTCGCGCTTCTTTCCAACCCTCTTGACCTTTATGAGTTCTGTTCTTAGTGGCTACTAACTTTGATCACTTTTGACCTTGCTGACCTATGACCTTGCTGACCTATGGTATCACTGACTGTTGACCTCGCTGACCCATGACCTCATTAACTGTTGACGGCCATTAACGGTCTTTAATGTTGTCTCCACTtgtagatttttaattttaatgtCTAGAACAGTTTTGGGATTGTTCTTGTTTCAGTATCAGCACGGACGAAAAGTTAGCTTGATAGAATTAACGTGacgaaaaatttccaaaatagaGTGAGAtgtttgcatttcaaaattattattgcCATGTTAGGATGTGTTCCTCCATCCACGCTTGGCATAAAGacatatttttgcttaagTCTGGCTGATCTGACGGAATGATTTGAACTGTACTGTCCTTAGGTTTGGCTTTTGAAGGCTTGATATTGTGAAATTGATCTCGATTTTGAGTTTTTAACTGTATTACatattttatgacattttcaaTTGACTTCGAAGTAGTCCATTTAATAAAATTAGTAGCCAGGAATGAACGTTGTGTGACCccgttatttgttttcaagtcatttaacaattttgcttttgatattttgctttgcCTTTCCCCCCGAAATTCTGTGATCGCCAACTGAAATACCACTGATCTGCAAAGAGACTGGACCGACATTCAAGGGTTGGCAAAGCATTTTATGAAAGGAACTTGTTGGTGAAAAACTGTTGGCTTTCCGTCGTTTTCATTACGTCGTCTGTACTACTTCGATTATTTCTCCTGATAGTGTTTTCATCCTAaccctttttcttttgtgatACTCgtatacaaaatattttacccATGAAATGTAATTGTGAAGTATATATCTTGTTGGGGATTCCTTGGAATTTTAATGGGTCTCAAAACTTGTTATAGCAAACAGCAAAGAATCCAAGTTCTTTTAACAGATCAGTGGTACAAATGAGCTTAGCATCATTTCCACCCCTTTTATTATTAGGAtgaactttttatttaatagAAAAGGTCGTTTGAACTGCAATTTTTAGCCAAACACAATGTTTAAAAACTGCACGAAAaagatgaaacatttttcagtaaactgaatttgttgcaaaatgatACCACTTTTTATGCAATCCAGCTTATTTCCAGCTTATTTCCAgcttatttttattcaaattgctTGCTAGAAACAGCGCATACATTACTTCCTAGTAAGTTCTATTATAACATCTTGATCATTACGCCATTGACTTTGTTGACACTGTTAAGATCACTTACATATACCGTAATTAAAACTCTCGCATGACGTCGATTCTTCTGTAGCCTGTACTTCCCATGAATCCCTTAGTAAAAGGAGAGACAGGCTGTACTTGGTTCATGTATATTTTCACCGTAAAAAGACATATTTTCATACTGCATGTTAAAATGTGAAAACCGTCAGTTTTGAATGACTTGATACTAGCAATTAAGTATTTCATCATTTCGAAGTGAAAATAGCAAATGAGATAGACAGCTATTCCTAATTATACTTCACGGTGTCacatttgtttttccttttgatttgtCTCAGGGACAAGACTGTTTtctctaaatttattttgaaactgtttgCCAGTACCAATAGAAGTAAGGCAACGTGCAAAATGAAACGACACTGAAAATATAACACACGAATCTCTTAATGTTGTCTCCAGCTAAATTATCAAGGTTGTGTCTTTCTGAAGTCTAATCGGCTATGTACTAGAAAGCGGTAAGAAATTTATCAGATGTATTAAAGTGCATGCCATGGCCAATGCAAAATGTAATTTCTATTTACAAAGAGCCATCATCTACATGTGAAAAGGGGAACAAAGTACAATCTTCAGTGGCGACCCAAAATTATAACTAGAACAGTTCTTGTTAATAACCTCCCAATAAACGTCTGCTTCGCTCTGCGTCTAAAGACCTTGTTTCAAGTgttttcaatgtcattttttatcaacCTAAGTCACTACGTAATAAACCAACATTGCTTCAAGATGGATTGGGCGAATTCGACTTTTAAAATACTTGGCTAATCAATGAAAAGTGGTATTAAATTCGTCCAATGGCAATATCGGGCTGTTGAGcttcaaatttataaagtGTATTCTGGTAGTAAATATTTCCCTTGCAATGTAATTGTGCCTCAATTTTACAATGCTTAAAGTTTCTTTCAGGGCGCCGTTACCTATCATATTTTGtgcttccttttttctaagcTTGTGTAttaattgtgaatttttttccaaaatatcgATTCGTTTCCATGATCCCAAAGGATGAAATGCATGGCTAGTGAAGTATGCAAGAGAGGAATGAAAGGTCCAGACcctcttttttaattttataagaCAAGTGTTATCCAGAAAACGTTCAGAAGACCGTTTTTGAATTCTCTCTTGCTACGgctctaaattttcaattttacccACTTCTGTATTTTACTAGTCATGTTAAGGACATATCTCCAAACGTTTaattgggaatttttttaactaaccggataaaaaagatgaactTGTCTGTGTTTGGGTTTTGGAATCTATATCTCGTCACATTGAGGCTGCAAGCTGGCTTCGAACGAGGCAACGCACTGCCCAGCCTAGTTTGAAGCGAAATGCGgcaaatgatttgaaaattacaagcaCAAGAAATCCAGCACTGAACGATTTTGTCTCCTAAAGTACAAATTGCTTGGTAAGTGGGCCCAATTTGACAGATTTATTCGTATAGGAACTTGTTGAGaatatgataaacaaaattaacgCCAGAGCAAATAAATTTCGTTAAGTAGCCTAGAGTGTTTTCAATGAGATTTAGTTCTCTGCATTTAGATCCCATTAAAGAACAGTTTATCGAAAAACactataaaatattatatgtACAATATAAATTAATCTGAGTATACTGGTGGAAAGTCAAAGCATGATTTACGGtacttaaaaagttttacGATGTTTCAAGATAAGTTAACAAAGTTAGAACGAAAATCAGTTGGAATGGGTTTGTGGTCTTTGCTTTGAAACACTCAAAGGGGAAGATTTTCCAGTTTATCCTAATATTGTCTTTGTGTTCAATGATATTgtctttgtcaaatttcacATAATCCTTTCAGGTGTTcagattcaaagaaaaaggctttgattttttaatgacAAGTTTTTTACACTAAATTActtcaatatttataaatatctCTTTGCAACACATTGCATGTACATTTACTTCTATCAATTACTGTCTGCATTCTATAGAGAGGATTCTGACTGGATGATTGCCCCAAAAATATCAGACTGGCTAAAGGGGCAATTTTAGTGTATTTCCAAAGTTTAAGATAAAGTTGTCTTCTAAGTTGTTTATGTCCCTTGATAAACTTATTTATCTGAATtaacaaagaatgaaaacacacttgagaaattttgtcatCATTTTATTTCCAGAACTGAGGAATATCTTGGTATGGTTGGTAGATCATCTGATGTAGTTAGATCTTGTGATATTCCAAGATATACCATTAGCCAAAACTGTAGTTAGATATGAATTCACCAAAAACTGTTTCTGGTGAATGAGTATTTAAATACAGTTTTGGCTAATGGTTTCGAACTTTACCAATCAATAGGCCTTaagatttttagaatattgttaatttcttgcttttgatattatttgtatttcttttaaagaccCACTGTCAACCAACAAAGAAGCCTTTATGATTTACAGGGTATTCTCTTGTTTATCAACATCTCGTCTGCTCACTTTCCAGATTTTCTGTGtgtcagaaaataaaagatgcGCAGTTACACCAGAAAGGTAAACATAACAAACACACAAAGCTGCTGGTGTCAGTTAGGGCTGCcgttttgtagaaaatatgCTGACGAATAGAAAGTTGCTAACTCCGCCACCTCAGATTCAGCTGAGAGCGACAAAATATTAcccaaagtttgaaaacaatttgcatCATGAAGCTATGGGGATATGTGAAACTGCTTTTTGTTATCAGACACTCCATACACTCATGTCCTTGGATACAGCTTAATGCCTATACAAATtgcttgaatttgaaattaatttgagGCCAGCACTTCAAGAGTAACAGAACTGCACATACTCAATTTTCTGACAcagaaatttgtgaaattgAGCAGACGCAATGTTGATAAACAAGAGAAGACCCTGTAAAATATTGAGGGTTCTTTCTTGGTTGACAGTTGATCTTTAACtatcctttttaattgtttcaacattatatgcttccatttttcaacaatataTTCTTGCTTATTCTTACTTTTAATTAACACTACTTTTTAGAGATTTGGCAGAGAAATGACAAGTACCAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11531 all species →	CARM1	Coactivator-associated arginine methyltransferase 1 N terminal	Domain	Interproscan
PF13649 all species →	Methyltransf_25	Methyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020989 all species →	Domain	Histone-arginine methyltransferase CARM1, N-terminal	Interproscan
IPR025799 all species →	Family	Protein arginine N-methyltransferase	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR041698 all species →	Domain	Methyltransferase domain 25	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11006 all species →	PROTEIN ARGININE N-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016274 all species →	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216 all species →	Biological Process	peptidyl-arginine methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05931	CARM1, PRMT4; type I protein arginine methyltransferase	EC:2.1.1.319	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.