Gene detail

Detailed information of XP_065069374.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_107:716032...722966
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065213302.1

GTCTAAAGTAAATGTAGGTGTTCATAGAAAAGAGGCCAATGACCTGGATCAAACAGTAGGTAAACAGATGGAAATCGGGAACAAAAAGAACGAGTCTGAAACAAGCCTCACCCAAAtgcagaaagaaaacaatacaGAAGGAAATGCAGCCATTACACATCAGCAAGCCCAAGAGATATCTAAAGAAGTTCCAGTATTATTTCCGACATCCATATATGAGGTTGCTGGTTGCTTATGGTGTcacaatttgtaattttttcatctatgCAGAAGATCCAGTTGCACATAGCTTTAAAGAATGCACTATACCAGCAATTGGCAATGACTATGCCTTTGTGGCCACCAGGTATCCACCAAATGGTTTCTCTGCACTCAAGGTATTCCTCTACCTTTTTGCCATAGTGCTGGCACTTATTGCTGGAAAGCTTGTGATTCACCGGCTGCTGctcagaaaatgttttagattatcaatgtttcaaaatgaccAAGGCTCGTGGATGATCATGTTTTTTGCTTCCATCATCACTCTCCtcattttttcctttatttataATGGGTTTCTTGGATTAGACTCAGTAAATGGGGCACCTTACAAGATTTCATCCAAAATGGGCATAACAAATCACACATTTATGAAAGCCGCAGCATTGGGAACCTGGATGGGGGATTTCATCACAGCTTGGATGGTCACTGACATGATGCTTCAGGAAGTTGCAAAGTATCCGGATTGGGCCAAGCCTGTGCGAAACTGGTGGAACAAAGGATGGAACCGAGTGATCCTATTCTGGGCAGTTCTAGTCATTCTCACATCAATTGTAGCCTCGGCTATCATAGCAGACTACATCAATTGGGACACACTCAACAAGGACTTTGTCCACACAAGTGAACTGGgtcgaggatttttagcatCGTTTATCCTTGTCATGGATTTCACCATTGTCATGCAGGATTGGGACTTTCCGCTTTTCGAAACCAATTTTGACGTAAAACTTCCAGGGATCAACACTGCTTACATACACTTTAAGATCCCTGATTGCTTGCGAAAAGAGCACTGGATGGTGCATATAACCGGTAAATGGTTCAACTATGGAATTCTCCTCATGGTTATGTTGCTTGATCTCAACATGTGGAAgaaccaaatattttacaaaccGTTCGACTATGGGCAGTATGTTGGACCAAATGGAAAGGTTTATTCGGTGACAGACCGTAACTTCTTGGAAACTGCGAACAAATCGACCCTTTCGTATGCTTGGCGTTGGAGCCATCCATCTGTTAACAACAGTTTTGGCAGCAGAGATCCCCTTGTTAATTCAAGATACCGGGGCCACTCCCTAGCTGTCACTGGAACTGCCTTCATACCATGTCTGCTTACTTTCGTGGTTTTCGGTTCTCTCATATGGCTGTTCGGGCGTACCGATAATGTGGACGACATTCAAGCAATAAGCATCCACCATAAGTCGAGTCTGCGCAGGATAACGAGCATAGCCGTCAAGAAGGAGAAAGATCACGTGGATGGTAGTGGATGTATGGAGACTGAGGATGGTGATGAGATCATTGCCAAACCTGCTGTTGGATACGGGACTATTAACGAAGAAGGTGATACTGACTGTGCCGCCAAGGCCTAAGACTGTATGCCTGTAGAATTAGATTCTATTCTGTGCCTGTAGCACTTAAGAGTATAGACGGGAACATGGGTAAGGTGTCATATCGCTCAATTAATGCATACAAGGAGGTGTATAAACATTTAGCAAGGAAAACGCCAGGCTTGAAGGGATTTTGTGTACTTAGAATAGAATCATAATCTACTGGGCGTTACATAGATTTATGTTGTCTTCgagttttataattttgaatttttaatgcgTATCTTTAgaagttaaaaattatttatatttagtCAATAAATGTTGTTGAGAATTTACATGATAAAAGATTTGTTGAAAGTTGTTTAGTAAGTTAAACGCTCCTTCGTAACATGTTGTTAACTATTTAGAAAAACTACATTTCTAGCGAATATTGTTATGAGAAATCTGCAGTTGTaggtttttcaacttttttccagTTGAAGTGTCAATTTGTTCCCTTTTTGATGTTTCTGATGGAACGTGTTATCTTAAGTACTCGGCTACTTTTTCATAAACTTGCATATTTTTACATTcctttttgaagttttgtttattaattaagtatttaaaatgaattctaGGTTTGATGAAATAGTGTTTAGAATGtaatcattttcaatgaaagtTATTTCCTATGATGTTCGGTGTCAGaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15113 all species →	TMEM117	TMEM117 protein family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029370 all species →	Family	TMEM117 protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31226 all species →	TRANSMEMBRANE PROTEIN 117	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0070059 all species →	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065069374.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.