Gene detail

Detailed information of XP_065069686.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_92:9798523...9802112
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065213614.1

AGCTCAATGTGTAATAACATTTCCTTCATCGCATGTATACCTGGCGTAAGCAGACGACAATCTAAAGTAAAACCAAAAGCAGGATGCAAATATAGCAAAAATCTTCCAAAGTTTCCATGATCCCACCGTCTGCTTTTCCACGAGAACTGCttttcaggggggggggggtgacaaaaacattaataagtaagaagataaatacCACGTAATAAGAGTGTTCGTTCATAGTTAGTTTTTGATTCTTCTCTAAAAGGTGGCAAGGGAGGGTGCCTGTTTGGCATCAGGTTCAAGTTGGTTCCAAATTTTAGGTCCACGAAAAGAAATGGCTCTCTGCCCATTGTTTGTTTTCCGTAAGGGTATCGAAGATCGGTATCGGTATTTCTCAGTTTTCTAACATTtcgaatcgaatttttttcgaaCAGGTTGGAAAGGTACTCTGGGACGAGCCCATTTAACGTCTTGTACATTATTGTAGCTGTTTCGCTTCTAATAATGTCATCTATAGTTGGCCAACCCAAACTGCGAATCAGTGGCATAGCAGGTGCATCAACTCTGCTTTTAACTCGATTCTGCAGCTTTTGCAACGATTGCAGTTTAGTCACCCCACAGCACCCCCATACCGAACAGCAGAATCGAAAATTGGGCTCGACGATACCCCAATTTACTCAACGTGTTTTGaggtaaacattttctggaatgtttcaaaaatccgATTACACGAGAAACTTTGGTACGGAGACTGTTAGCGTGTTCCTCCCAATTTAAGCTTCTATCCATGATCACATCCAGATACTTTGTTCGGTCAGCTTTTTCAACTTCAGAGTCACTAATAAAAACCAGTGGATGAtcaactgttttatttttcaattttgggCTGGGGGATGACATGATAAATCACAAGTTTCTGAAAACCCCTGCAGAGTTGCTTGCTTTTGCTGGACATATTACCTATAAGCTGcatctagataaaaaattatttattactCCGTACAATAATATCATAGTCAATTTGACTATGGTACAGTCaatacaatttattttcttcctcATATGATAGCGCGGGGAACATATGTTTCTACTGAGGAAACAGCCTCGTCTTAATGATTCCTGATTGATTTTTGGCGGGTAATCAAAGTTACTGCCACAACGATGCCACTGGGAGATATTTTGGAGGAAATTGATACTTTACGTGCTATATTTTGTCAGGATGGAGAGTTCTGCCTTCATTCTGATTTGGATTGTTTACGTGAGGCCAATGCTTATAGCATCAGCTTCTCAATTAATGTAAATGTTGATGTGGAAGCTGCATATTCTGCAAGCAGCGCTGCTGCAAGTTCCGTTGCGAAAAAAGAGCCTAAAACGGTGAACCTAGTTCTTTCCGTTTCGATTGATTGTAAGTATCCAGATGAGCTGGAAAGTATTTCAGTTACAAGCACAGATATGAAAAGAGCTGAGGTCGATACTTTGAAAGCGGGGCTTGTTCAATATATTGGCCGTTGTTTAAAAGGTCGTGGAGAACCAATGATATTGGATATTGTTCAATGGATGAAGGAAAATACAGAACGGTTTATTGTTAAAGACAAGGAAAGGATTCACAATATGCATCAACAGTCTTCGGGAGCAGAAGAACAAGGAAATCCCAATGTATCAAgcgaaaaatgttttgttttgaaacttgaTCACATGAGAGCCAAACAAAAGTACAAAAAGACCATATTAAGTTGGATGAATAAACTGAATCTTTATGGaagattgattttctttaaaaaatcaatttggaTTGTTGTATATGGAAAACATGAGTCCATCAAGGAGTACATTAAGCTTCACAGATCACAAAATGTTGATGTGGACTCAAGTGGCAGACCATGCAAAGAGAGAATGATGAgcattttgcttgaatttgATTGCTCACTCTCCAACGACGAGCTTGATGGATTTAAAGTTATAGAGTGTGAAACATGGGATGAAGTTAGCAAGGCGTTCCAGGTCTTTGGCGTTGATCCTGAGAAGTTGTAAAAGGTGAGAATTATTCATTGAAAgtaatataaacaaaaagtgGATGTGAAGTTTTCATAATGGCAGAAGCATATTAAAGATGGTCAAAATGAGGCGAAGGGGCCAAGATATGTGAAGCAAGCCAGCTTGTGGGGGCCAAAGGAGTTTCCTGGGAATTTTTGCAACCACACCTTTGGAATGCTAGAAATGACTCTTTGAAAACTAACATGAAATCAACTATGCTATAGAGTTCTTAGGTGTGATGTcacaaaaagttatttttataatttttgaattttgaccacataacataaaatagcattttggTTTGGTTCATGATGTTATGAGCAAAGACCAGATCCCAGtggtttgatggggaaaagGCTGTGGTCAATTTGTAAACActatttattaaattattaaatttattaaatgGCAGATAAAATCACAACTTTAAGGTTAACACCAATAACGCCAAACGGTAAACTGAAAATGTAGCCAAGTAAGAAACAGCTTACATATTTGAGTGGGCCATAAGCTGAcataagcaattttttggcagtacaGAGTAATAGGTCCAGGGAACGTACTTGAAAGTAGAAGggccaaaaaattaaggtCTTGAAAGGGCTTAGGAAAGGCTGCCACCATGGTTGacagcaataaattttctagaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05773 all species →	RWD	RWD domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006575 all species →	Domain	RWD domain	Interproscan
IPR016135 all species →	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR038840 all species →	Family	RWD domain-containing protein 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15628 all species →	RWD DOMAIN-CONTAINING PROTEIN 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0032088 all species →	Biological Process	negative regulation of NF-kappaB transcription factor activity	Interproscan
GO:0033235 all species →	Biological Process	positive regulation of protein sumoylation	Interproscan
GO:1902073 all species →	Biological Process	positive regulation of hypoxia-inducible factor-1alpha signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065069686.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.