Gene detail

Detailed information of XP_065070045.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_92:8501723...8509638
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065213973.1

CCGGATTATTCGGACTTTCGGTAGGAAGACCATTTCCTTGAAAGTCCGTTTATATGGCACATTCTTGACTCGAAGGGATATCACAGGGAGAAATGTCAAGTAACCACAGCCAAGAAGATCATGCTGATACCCAACCAGGCTACAAGTGGATACATTGTTCgcggaaaatttttgaaatttcattttcaggtGGGAAAAATTCTCAGGAGGCTGTATGAATTCGAGGCTGGGATTACGCCAACAAATGTCAATGTACTTCGTTGCCTCAGGAGAATTGCATAGCTgtgaaaattgcaaagaattcTGTTGATATCGGAGAAAGATGGGGGTGTTGGACATCCCAGCACATCGAAGATTGATTAGAGAAGCAATTGCATTTGACAACTCGCATGTTGAAGAATATCACagtgatgaaaatattgaacagCATGCTGCTGCAAATGGGAGGCCACGCAGGCAGAGGACTCCTAAGCTTGGTAGAAAAGTCTTTGGCTCTCATGAAGTGAAGAGGGGCAATGGTGTTAGAAGACAAAGAAGGAATGAAAATTtgtttttcttatattcaTTGGTTGATGGAGTCGACCCAGATGAGTTGCAAGATGAAGATGATATGAGAATGACTGCCTTTGGAGAGCTTTTTGCAGATCCAACAAAAATGAGGGCATGGGCTGAGTTTATGGTGATGACAGAAGAGGACCAGATATCTTTCCTAGATGCATCTAATAAAAGTAGAAGTAACAGAAATAATGACGATGGAACTGAGGAATCTCATCTAGAGAAAGACTTTGAATGggagaatcaaaattttgtgaaaattaacaaaaacattcgAGACTTTCTGCGAAGTGAGGATCTTTCAAAGGAATCTCTAGCTGAATATGAAGAAGACTTGATaacttcattttttgaatCTGCATTTGATGTGCTTGTTTTGGATGTCCCATCAAGctTTGATAGGATGATGATTCATGGCCTTTGTCAGTACATGCAACTGCAAGCTTCAACTTCTTTTTTAGCACATAAGTTCAAGAAAAAACGTCTCATGGAGATTGAAAATCAGGCTTCTCCACTCACACTGCCAAGTCAATTACTATCAAGCTATTTAAATACAATCCACAAGTAAATTGCAGTTTAATGCATTATTTCGACATAATGATTCTAGTATATTTTCCATGTAATGAGTAACTATAccagaattttcttttaaaagatccctgatttgtttgaatttctttgcatGTGAATTCTTCCTTGTTTAggatttatatttttgataatccTCTTAATCCATTTTCAAACGAATCGAGGTTTGACATTGCTCTTACATTGAGTAAGCCTGTTGGactattcaattcaattttttcatataatgCTTCCTAAATATACAGCTGTACCccatgaaaaacaaaagttatcaAGCATGGGCCTCTAATAATAAAGAAACAGTAAGCTGAAATCATTACATACAAGCTACAGGCAGCATTCAGATCTTTACTTGCAACTGACAGCGCCACAAGTGGTGGGTGACGCCGAAGAAGTGGCGGAAATCGAGTTTTACGAGTAGCAAGGCAATTTCTTGTTTGAGCCGCcgttttcttctaaaaaatgaCTGACTTTCGTAGAAGATTGTCCAAGCCATAATGAATTGGCGGGGCTTGGAACGGTTCGCCTATTCCACAGGTTATGGAATTCCGACTCTGTTTTGGAGCCCCCTCTGTCCAGGGCCGGCGAAAGGTATTTTAAACTGGGAGTGCcaaaggattttaaaaaagatttaaaaaaaacacacATTGCTAGAAACCAAAATGGGAGGAAGGGAACAGGAAAAGAGAAGAGCGTTGAAGAGTCTCCCAACAATCACGATAAGCCCCACCCAAACGCTTAATTACCCTCATCAGAGCAAAGGGACCAACAACGCCGTGTAGAAACCCAAAATACAGAACTCCTGCTGCCCTATATCCCAAATGTATCGACAAGTGCACACAAGGACCAATTACTAGAATGAAACCATGATAAATGACACCCAAAGGGGGAAAGACAATTCGGATAAAAGTAAAACCCCTAGcaaatcaaattctacaacatCCTACGTGAAATTAActatgataaaatttcattttatccgCATTTAATGAAGCTTagtttagcaataaaaaatgaacacaagtataaattttcttcctgGCAGTTCCCTTGCACTTAATAGCTTGTACTCCCTCTATCCGTAACAAGTTTGTCTGTTAACAAACAGACTTTGTGGACCAGGTTAAggctaaagaaaaaaaacaaaactcctGCACAAAATTATTCTGGCTTTGGTTTTGCACATTGATCTAAATCATAAATCCAAGGTCCCACAATGGTTTTgataatcaatttttcaaaaactgctgCTTCTAGAGTGCAACGTGTAAGGCACAACTTGGATAATGATTCGATTCCTTCGATCAATTTCCCATCACTCTTATTAAAATGTTAAATTCTGGTCAATGTTCTAATCAATATTTAAATGGTAAAGCAGAATGGTAAATTACAGTTCTTTTTACATTTgcctaataattttgctttgttctgcagaaaagtgggggcaTGGCCCCCGGCTCCccgtttcgccggccctgtcTGTCTCTATTTTAGATCCCTTTTTTTCTAGTTCTTCATTAAGACGTTTCTGGAAAGGAAAACGCAATGAATGCGTGTGccatgaaataaaagtttttgccaAGGGGGGGCATGGTCCCCCGCGCCCCCTTCGTCAGATGCCTTGGTGATAAGTTTGTTACTAAACATAACAGGACGTGTTTTAGTTTTCTGGcaacattattattttccttttcataaTCATCTCctaattttatttcacttttcaTGAAACAAATTACATCAACTTCTTAATATCCTAATTGTGTTTGTAATCTTAACTGGTAACAAGATCTGGTTTGTAGGGAAAGGTAAGTAGGTGCATGTATGGATACCGAAAAGAGACATCCCATTCTTTTCTATAGTTGGCCCCTCTTATATACGATATTAAGCCGGTTTTGGTaatatagtcgcaaagcatgctggttgcgcaagagcctttaaaaaCAGCAGTCACTTATTATGACCTTGATTTTTTCTGAAGTAATGTATCAATTAAGAACCTCTTAACAAGGAATGGAAAGAAATAACTTCGATATTAATGCTCATGTAATTGATTTCTGAATATCAGCTACAAACAGATTgacatataaaatatttaataaacttcatacaaaatgtaaaatgcaaacatattGCTTAAAATTGCAAGGGAAAATGATATTCTCTGAAATACTTATTTCTTAGAACATATGGATGGAAAAATTAGCTTTGCAAtaagaatgattttttcattctgCGAACGGAAGCAATTGATATATCTATACTATAACATTACGTTATTTTGGCAAGCGATGCAATGGctgataaattttctgatgaaaGATTGAAAGCAGGGGGTTt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13902 all species →	R3H-assoc	R3H-associated N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036867 all species →	Homologous_superfamily	R3H domain superfamily	Interproscan
IPR039629 all species →	Family	R3H domain-containing protein 4	Interproscan
IPR025952 all species →	Domain	R3H-associated N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32019 all species →	R3H DOMAIN-CONTAINING PROTEIN 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065070045.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.