Gene detail

Detailed information of XP_065070153.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_92:5318664...5336790
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065214081.1

GCGCACTGGCGCACAAGTTTGCTTTTGTAAACGAAGAAATCGAGGGAAACGAATTAGCGCGTCTACCATAATCGCAGTTGGCCATTCTGTGCTATTGCCTGGTGACAGGAAGACCAGAAACTGCACGATAAATATGAATGAATTCAATAACAACGATTTAGTCACTGATTGGGACTTGACAGCGTTTACTTCAAGCCAACAAGTATATCATGCTAGGCCAAGTTTGTTTACTGGAGATAAGGAGGATGTGCATGCACTAAATGGCATGGATATTTTTAACACTCCGCCGCATCTTGGAGAGCAGGATGAGAAGTTTTGTACAAGAAACAACGTTGATAGCAGGCTACGGTTTTTGAATCAGGAATTCATGGCGCTTGGCTTTCAAACTCTCTTTCCCAAGGGTGTTATTGCAGGCAGAGAAACAGATGCACGTTTTGATCTGTCTCGGCTTATCAATGTGGCATACGATCTTCTAAAGGCTCAAAAACAGCAGATGAAAGCTAGGGATGACCTCGAGGCTAAGCATGTCCGCTCTGAGGTAGACAACGATGCTTTGTTGCAGTCACAAAGCCGATTAAAGGAGGAACTTGAGGCTGCTAAACGTGAGATATGTGTAAGCCAAATGAGAGAAAAGAGGCTTACAGAGCAGTTTAAGCTGTTGCAACAGGAGAGAAAGTTGGAGCGCGAAGAGATGAAAAAGATGCGAAGTGACATGCAACATAAACACAAACAGTTTATTCACGAATCAAAGCGCAGGGAAAAAGAAATGCATAAACTTAAGGAAAGGCTTCATCAGCTATTAACTGATAAAACATTGGAGAAAAGAATGGGGATGGAAGTATTGAATTCAATACAGAGAGCTGATGGCAAAAGAAAACTATGGAAAACAGGTGGAAAagatgaagaaaaaatgtatCAACGTATTATCTcaaattatgaagaaaaacacCAGGAACTCACCCTGGAAATCACCCTACTACGGGAGTACTTAGCAGATATTCAAAAAGAACTGTCTTCGTTAGTAGCACAGAAAACAGTCGATTGCAAGAACGGAAATGAAgaatACACTGATGAAAAACCATTGCTGGATGATGGCCATTTCCAAATGCCGTTCCACGTTGTAGGAGAGGATGTAAAAAGCCATTTTAGAGTGGCATGGCAAcaactaaaagaaaaactggaacaaaattcatcaaaagGCTCTTCGCCAATAGACAATGATAGCCAGGTAGAATCTGAAGCATCGTCTCAGCAGATTGCTTCAATGAAAGAACAAATCGACGATTACAGATCAATCATTTCCAAGCAAGAGCAACTATTAAAGTCATTACAAGATGACACCATGATGGAGCGAATAGAGACATATTTAAGGGGCGATGATACTATCAAAGAACGAGAGCAGAAATTAAGGAAGGAACGGGAAAAACTgttgaatgaaagaaaagtaGCCACGGAACTAGCCTTGAATCTAGCTCAAGACagagaAGGGtttgaaaaggagaaaatgGAGTTTTACAAGCATTGTATTTCAACGCCGGTTATAAGAAATGAAGCAAGAGACACCAAGAAAGGAATTCAGCAATCACAGAATCGAACAAAATTCCAAAGTGCTGACCCTGTATTCAGCCCTTCACCAAAGTTCACCAGTATTAAATCAAAAAGTGCGGATCAACAGAAAACGCCATCGACTGCAGAGTTATACCGATATATGTCGCTGGCCATATACGAAGACGTTAATGGCGATCATGATGGCTCATATCTGGAAGAAGAGAGCGAAAAAGCTCCAGTTGTAAGGACCGAGAGCAATGCTTCAAACACGGGCAAAAGCAGTGGTAACCGCAGTGGCATCAGAAAAGAGCGTGTTGCAGAACATGCCGAGAACGTCAGGCGCGTTTTAGAAAAGATGCCAAGAAGGAGTTTTGAAGAAGTGACTGCTGTgtattaatgttttttgtcaaatgaaaattgttctttcGCTTTACGAGTTCCAACACCATGTCGGAAGTGGGAACTAACTTGGtgaaactgataaaaattccttttttcattttttgcaaagttccAACAAGATGATATAACTGATCCTAGTGTTTTGCGCCTAAGAGGTTTCACCTATAATGGAAATACTGCATGCTAATTGGGAGAGAAAATTTAACTAAttcataaaatcaacaaaatttgtgaGCGGTTGTGAGCTTTGAGTGTTTAATATTACTCGATAGAGCCATTGCATCGGATAGACACTTTCTTAGAGACTGTAGAGATTATCTTCCCCATATCCTCTCCTCTCCATATACATGCGGGTGACtctaaatttccttttatgTGGCTCtaaatttcgttttttgtGGCTTGTGCAATATATAAGCTGCTGGGAGTCCTAGATTCAAGTTTTCATAGAATCCATTACTAAGGTTGCTGAGCAACTTGAGCAATTAAGATATTGTTACTTAAAACTGGGAGTTGTAGAAATATGTACACGTTTTTAGGGTTAAACGAGGGGGAAGTCCTGTGTTATTTTCTGGGTTGTGATGTGACTTCATATCAAACAGTAAATCCCTGCTAAGAAGAACCTGCTTTTTCAAGAGTTTGCTCTTAGCATGCGACTAGCTCCTAATATTTCGATCACATCGCTGAACAATGTGACCTGATTGAAACAAGAGGGGCTACATACAGGCTAGATGCTCCTAGATCTTGTTGCAGGTTGCACATGAGGATCCCAGGTTCAAAGGTTATTGCATTAGGGTCTTTAGGGTCTACAGTGATGATAACTTCGTTGATGATGCCTTGCATGTAGGCCTCCTCATAGAAATAAATGGTTCAGGGACAATACcatttagaataaaaatctgaaaatttgtcaGGTTGAAAAAGGGCCCTTAGCCGGGTTTCATAttatcgggattccactgtagatTAGTCctataattatttcaaaattttctatttagtTCGCAATCCTGACAAGGTGTTAAGCCTTTTTTGAAGTGGCACTAAGTAATTGTACCAAggaaatatttacatttaaaccCATCTCGAAACgaacaaaacaaatcattgATAGAGAATTTCGCTCTCAGAATAAAAAAAGGCGTGTGACATTTTGCACTCCTCGAAAGCTGTAGGCGTGTGCCAGGGCGTGCGCATGCGATCGCACGCCTTTCCGACGAAAGCCTGAGGGGATTTAACACAAAGGTGCTTAATCAGAGAAAGACTGTCTGTATGTTTGTCAGGTGTTGTTTGCAGGGATTTACTGTATTTTGTTAATGGTTGAAAGTGTTTATTCTTCGTTTAACATAAGATAAGATGTTAAACACGAGAACAGTTTATTCTGCTAATAGTTTCGAGAAGTagtatgaatttttgataGCAAATCGATAGTTGTATTAGAATGTTTAGTCCAGTAGGTGTAAATTGTTTCAGATGAAAATTGGTTCTAGCAAAGCTTGTAATAATTTTCCTTGTGATATCGTGCAGCATAATTCGTTTTGTTGAAAGCGTGACCATTTTGTAGATTTTGCAATGAGATGTCTGAGGAGTAACAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11559 all species →	ADIP	Afadin- and alpha -actinin-Binding	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052300 all species →	Family	Adhesion and Centrosome-associated Protein	Interproscan
IPR021622 all species →	Family	Afadin/alpha-actinin-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46507 all species →	AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0034451 all species →	Cellular Component	centriolar satellite	Interproscan
GO:0035735 all species →	Biological Process	intraciliary transport involved in cilium assembly	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065070153.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.