Gene detail

Detailed information of XP_065070652.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_979:4352053...4358129
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065214580.1

TAAGCAATACGtcgttgaaaacaaaacagacaaGGTTGCCAAAAACTGCTGGGCATTAGGCATCACCAAGAACTTTATACAAAgtcatcaaaaacaacaatggcAAAATGACACTTCAAGAATGCCAGCATCGGCCTGGGTCTGAAATGAAATGAGCCAAGTCATTCATTCTTGCGAAAATTTCTTGTACTCGGATAAAGGAATCACTATCATCCAAATGCCATAAATTCAATGACGGAAGTGGCCGTTATCTATTGAAATATGAAACAATACAAACTACAAGAGCTGGTTGGAAATACAAAGAAACTCCCACATGCTGAGAAGCTCTTTTATGAAACACTGATAAGCTTCAGAAAGCTACCAGAATGTGCCCAATTGTTTTTGCCATTACAGCTTCAAAACCACTTGAGATCAATATCACGAAAAAGCTCCTCTATATCcaatggaaaatatgaaagtaGCAAGCACAATAGTGTGAAAAGGCAATGTTCAAAAGAAGATGAGGAAATACAGAGTTATGCAGAGTGGAAGGTTTTTGTATCATGGCTTAAACTGACCTCGTGGAAACACTTTCGGAGATTCCGAAAATCAGTTGTATACATCTTGCCAATTGGTCCTTTTCCAGAAGGATTACTAAATGCACTTGTATCTCCACAGTTTTCATTTCTGCAAGCGCTAGTCTGTTTTGGGGAAGCATTTTTCAGTGGAATATCTTTTCAGATATTACCAGAAATTGAGTTCAAAGAAATCGGATGTACAACAAGAATACACAACAAAACTGGCCAACTACAGCTTTTCTTACCAGatGTAATGGTGTATTTATCAAGCATTGCACCCAAAAATTCTGTTGGCATAATTGGTCTAAGCTGGGTAGATTTCTATCCTGGTGATGAGTGGAATCATATATTAGGAGAAGGATCAGTTCATACTGGTTGTGCTGCAATTAGTTTCGGGCATTATGCTAAATTCATATCGGCAGGGTCTCAAAGTCCTTCTACCACTAGAGGGCAAAGCACGCCAAGCATGACACTCAGCTTTGCCTCTGAGAAGAGTGGGACTGCCTCGAAATCCGCGAAGGATCAACTTGATGCAAGGCGTGAATCAGCGTCGTTTCAAGACAAAAGATACCCTAAGTCGTTGCTTAATGATTCTTCGAGACGAAAAGCCTCTTCGTCATTAAGCctaaaaatgagaaaaggtTCTGTGACATCCGATATTTCCCTGAATGGCCCACTGAGTCGTTCTATAAGCAGCTACAAGAACCTTGGCTCTTTGTCCTCGATAGAAAACTCGTGGACTAAACTGTTCTCAAGGTCGGTTAATTCGCTATGTTCAAGCTTGTCAGTTGATGATGCTTCATATGATATCATAAATAAAGATGAAGCTGGGACATTTTTCACGAGTCAAGTCATGGAAGAGGACGTCGTTAAGCTTGCTTTGCCCGTTGGGACAGAGTTTCACTTAAGCTGCAAAGCAATGTGGAGGATATTCAAGgCTATGACGCATGAGCTCTGCCATGTTTTTGGCCTAAGTCACTGCAACTTTTACGAATGCGCAATGAACAGCAGTAAGTTTGTCTCAGAAGTTGATGAGCAGCCTATCTTCCTATGTCCTGTTTGTTTGCGAAAGCtgcaaaagtttcttaaattcaaactttcagaaCGATACTGGAAGCTCCGTGCAGCGTTAAACGCTATGCAATCGTGTTATATGGAAAGCATATCCCTAACGAGGGCTGACTCCTTTGACGAAATTGGCGACGAAGTTCTCGACTCTGATGCAGCTGGTGAAAATGATGTCGATATCCCTGAATATTGTGGCTTGGCTGAGCATGAGCCTGCAAGACATATATGCATCGAGGTCACACGAGAGAAAACTGACGGCTATGACATCATCAATGtagaatataaacaaaaggGGATCTCTAACACAGGATCCAGTCAAGTTCACGACTGTCATTTTAGAGAGGCCATTGGAAAGCTAGATGATATTATTTCGTTTTTAAATCGAAATTAGCTACACTAAAGTGTGATTTTTAATTCGTAgtatattgtttatttgtttttatgaccTGACAGAGATGCATTTAACATAGtttacattaaaacaaatttgttataAACATATGTGATTGCCATGATCAGTGTTTAAAGTAGGGATCGTCAGGAGGGGCAGAAATCCGTCGTTTCGcacaatttttgttgaaacccGACATCTCTGTcatttttagccaaaattCTGTGtccaaaattattgataacAAGCCAAGATTTGACCGGGTccctttttgcaagaaaacagGTGGAATAATCCCGGAAATCCgtaaaactttataaaactTTAATATTCCCTGAGAAAATCTACGTCCGGCAAGTGTTCCGGcatgccaatttttttaaaaccctTATGACCCCCagttttaaaggcaatctgtcacgacgttgattggtcataagaacaaagggatttctattgtttccagtccctctttaatttatcgcattgtaaaaaatatggcggagcgctggaatcgtgtttaggctattgttccagctattgttctcgttaaccaatccacaacgagacagataGCCTTAAAGTGTCTTAACAAATTTCGATTGGTTGCCAGATTTGATTGCTTTGACTTCATTTTGGGAGCATTTGCTCAAGCTAATAATCATATTAGACTGCTGTAAATGCATTCGATATTATACCCTAGAAACCTAACATCAGTACTTTGATGAATCCCAGGGTCACTTGGTGTATAAGAAGGGGGCGAACTGATAAAAACAGATTCAAGTTATTCTCTCACTCCAATTGCGCATGGAGCAGTCCGACGAGGAAGCATTGGAAGTTCTTGTGCTTTCCAGCCTATTTATGATTAATAGTTTTctccaatttcaaaaaagtaataaaaaatatcgCCATGTTTAATGGACATCTTAAGCAAACAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07998 all species →	Peptidase_M54	Peptidase family M54	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012962 all species →	Family	Peptidase M54, archaemetzincin	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15910 all species →	ARCHAEMETZINCIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065070652.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.