Gene detail

Detailed information of XP_065071069.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1656:7758718...7766106
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065214997.1

TAAAGAATTAGCATACTTGCATTGCACAGGACACATGTAGGAGTAGGTTTGCACAGCAAAAGTTGTGTAAGCGTCAAAGAATCAAACTGTTAATGCAGAAAGCCTTGTGAGGCGATGCCTGAGCTATGGAGGTAGCTAAAGATATCGGTGCTGATAAAATTCAAGACAATATAGCATCAAGGCTACGAGGACGTCTACAAGACGACACAGGCCACATCAGTGAGGCATTCCCTCCTGACACTGCCAACAGCCACAAAATGACAGCTAACACCGGCTCAAGTGTTAAATTCAGGACTTTTGTAATGGCTGGGGCTGCTGCAGGAATTATGGAGCACTGTGTTATGTACCCCGTTGACTGTGTAAAGACACGAATGCAATGTCTCAGACCTAGCCCAGGAGCAATATATGATGGGATAATGGATGCATTTAGAAAGATGGTCCGGACTGAAGGTGCCCTTTCTCCATTCAGAGGAATGAATATTGTGGCATTAGGTGCAGGACCAGCCCATGCACTTTATTTCTCAAGCTATGAAGTCACAAAGAATTTTATTGGCAAACTTGGTCATGGCAATCATTCATCTGCATTGGCCTTTGGTGGGGCTGGTGTTGTTGCAACAATGTTTCATGATGGTGCAATGAATCCAATCGATTTTGTAAAGCAAAGGCTACAGATGTATGGGAGCCCATATCGTGGAGTCTTTCATTGTCTTCGAACTGTAATAAAGGAGGAAGGCATACAGGCATTTTACCGGAGCTATACAACCCAGTTGTCAATGAATATTCCATTTCAGTGTgtacattttataacatatgaaacattcagaaaaaaattcaatcctGGTGGTGCTTATAATCCATGGACTCATGTAATAGCTGGAGGTATAGCTGGTGCAACAGCAGCCGCAATAACCACACCGTTGGATGTAGCAAAAACATTGTTGAATACACAGGAGAAGTGTGCTGTTTGTGAAGTAATGCATTCAGACACCAGGGTCTTTATAACTGGAATGTTTAATGCAATGAAGTTAGTTTACAAACTTGAAGGAATGAAGGGATATTTCAGAGGCATCCAAGCAAGAATTATTTACCAAATGCCATCTTGTGCCATTAGTTGGTCTGTTTATGAGTTTTTTAAGCATCGGTTAACAATGACTCCAGAGGAACAAATTGAATGGATGGAAAGTGCCATATAGTGAATTTGATAGAGTTTGTAACAGTTTTTGCAGTTAGGGgttataaaaataaacaaaattttgtagcttttctGTTTAGATTCCCATAGAAATACCAATCTCTTATTTGCAATatcatgaagaaaaattgtcttcTGTATGTATGACCAGTAAAatatatgttattttatttttaattggCAAGCATTTTAGACCAAGTAAATTTAAGAACCATTTTAAACTTAAGTGGGTATTATCAATCATATTATAGAGGCCAGTTTTACCTGATTCATGAACACAGCTGAAAGTAGTTAAATGCAACTATCAAATTTAGATGGTTTCTACATTCAGGCTTGTCAGCCAGcctattttatgttttcataaacatCTTGGCCatgctaaaatttatttttgtacatggctgatgaaaatattattgctgGTGTTAGCGGccatttaaacttttttaaacttgaaattaaaaccTTTAAAGCAAAAGAGTCTAAATTTGCACAGGATTGTAAGAAAAAGGCTAATGTCTTAACTTAGaattaaattaaagaaatggAACAGCCATACTGAAGTCAGTGgatttaacttttttgcaaatacttCTTCATGTTTAGAACAATTTTCATAAGACTCAAAGATATTGCACAATTATTGTCTTGGTAAAGATGATTTAATAAGATCATGATAGTTAGATATGAAATTGGATTAAATAGCGCCAAGaaggttttttctttgaacAGCATGAAGGAAATTTAAACCTTTTGTCAACAAATCCTTGCCCCTTCCCCCCTAGAACTGCCAAGTTCCAACAGCTGAAAAGAACAGTTTgaaaacataataaatttGTCAAGGAAATAGGAGTATGTTGGTTGTTTCTCTCAGCATGTTCAATGAGTTTTTATCCAGCCATCGactatattttgaaatagcaCTTTTGTTTCTGTCTGCAAATATGTGACATCTTAGTACTTTTTCACATATACCTTCTATTAAATCAAGCATAATTGAGTATCTTTGAATAGGCATAATGTTTATGCGTGATATGATTCAACTATATGTTAGGTGAACTTAGTTGCATCTGTCTACTCTTCTCTCTTTCTAATAAATTATTAACGATCCCCATTTCTTATGTCGAATCGATATTTAATCAAGAAAGCGCATTTGCCAACTATATAAGAACAACAGTATATTGTTACTGTTCGCTAATCTCTTCATTGCTACCTcttctgatgaaaaataaaggcGCCTACTTTACTTTGatttgaacagaaaaataagttttatCTGCGATTTTATTTCGCTCGTGTCGCCAGAGTTcagttttctttatctttttactGTGTGATATTTGGTAGAGCATTATGTATAgtcaaaaaagctattttcatatttcttttttgaaactttcacTGGTATGGGTTGTCCGATatgaaacaacaacaacagagccacttttttaaaagcccTCGTCCCTCATCTTGCTAGCATTTTTATGATACTAGTAATTGCTTTTGTCAGTTATTGCTTTGAACCAAATATGATCGTAGATTCCAAGTCAAAAATCGAAGCTAGGTTAAAGTAttcaagccatttttcaaGTGTTGGACCTATTTGCCTCTTTTTGTTAGATCTAAAAAGAATGGTTTATGCAATCTTTTATCGTAAGTCTTTTTATTCTGTATACAGAAATAACAAGGGAGCAATGAATATAAGAGCTAAGTGAATGATAATGCTTTCATGCTTATTGTACTATACAAGTTGTGGGAAGTAGGTGCTTTTAGAATTGCTATCCAATTACGTACTTGATCTAGTGATGTTTTTTTTATCGAACAGTTTTGAGTGCACTTATCTGTCATAACTTTGCATGCAGATTTTGTCGGTCGCAAGTTgttattctgttttttatccCAAATCTTATCAGACAGCCAAGCTCAAGAATTATCAAGTAATTATCTCggtagaaacattttcaagtacTTCCTTGTCCATTTCCTAGAATtacattaaaacatttttatacgGCTAAAACTTTGTTCTTGCTTTATTATAAAGAACCTTTATTTAGTAATGAAAGCCATCGACTGTCTCCTTCAGATTACATGACATTTATTTAAGGATATGTTTTGTAATGTATTTCCAGTCAGATAGGTTGTTCCACAAAGCTGCGGTGTAGGTCCATTGCTTTTCATTGCCAAAAGCTTATGTTACTTATTTAGAATATAACATTTCTCACTTCTTACACGACTTCTGGTTCTTTAGTAAcgtttaaagtttttaagctGACCAATCTCGTTGACGGTACCTCTTTAGCAATTTTGCTGTTAACGCCAACAATTCAGaagtaaaatttaaacttctAAAGGCcaattttgacgatttttttaGTATTGAAAAACCAATCTTCTCTTTGTTAATGCCAAGAGTTTCCATATTTATAAGCTTCTCGTTAGTGACGGATATCTCATTTCTGAATCAATTGCGCTCTGTTTCTGAAAACAggttatataaaaaatgagtctCGTGATTGCAGGGTTGGCACATTATTTTGTGACTTCCCTTGATACTATCGAAGCGTTTACTTTAAGTATCGtgcaaatttaatttttcatcaatttttatccCAAAGCCTGATTTTTGATACGTGCTCTCtcaaaataaacagcaaaGTTAAGTTACCTGTCAGTCAGCCGATGTTTGTTCTCGAGCTGTTCCTGAGGATCCTCGCTTACATTTCCTTTTAGGTAGCCAAGTTTAACCACGCCTGCAACAAATACTGTTAAGGGTAATTGAGAAACACATAGGTTTCTAGAgttcagtttttaaagttCAGATTTGCAGAATCGATATGAATTCTAAACAGTGCGGCTGCACTTGAAGAAATGGTCAACGATTTCTTTCGTTACATCTGCATAGTTTTCTGCATATGTTAAGTCATCTTCATAAAAGCTTATACA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45758 all species →	MITOFERRIN-1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015093 all species →	Molecular Function	ferrous iron transmembrane transporter activity	Interproscan
GO:0031966 all species →	Cellular Component	mitochondrial membrane	Interproscan
GO:0048250 all species →	Biological Process	iron import into the mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15113	SLC25A28_37, MFRN; solute carrier family 25 (mitochondrial iron transporter), member 28/37	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.