Genomic Location: ScUbCFx_1658:2167858...2193424
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families
| CDS |
| LOC135696716 |
| Transcript |
| rna-XM_065216200.1 |
| Protein |
| XP_065072272.1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | E3|E3 activity RING|PHD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF15613 all species → | WSD | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | Family | Interproscan |
| PF00628 all species → | PHD | PHD-finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR019787 all species → | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR028941 all species → | Domain | WHIM2 domain | Interproscan |
| IPR047174 all species → | Family | Tyrosine-protein kinase BAZ1B | Interproscan |
| IPR018501 all species → | Domain | DDT domain | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR019786 all species → | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46802 all species → | TYROSINE-PROTEIN KINASE BAZ1B | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006338 all species → | Biological Process | chromatin remodeling | Interproscan |
| GO:0006974 all species → | Biological Process | DNA damage response | Interproscan |
| GO:0035173 all species → | Molecular Function | histone kinase activity | Interproscan |
| GO:0042393 all species → | Molecular Function | histone binding | Interproscan |
| GO:0090535 all species → | Cellular Component | WICH complex | Interproscan |
| GO:0140801 all species → | Molecular Function | histone H2AXY142 kinase activity | Interproscan |
XP_065072272.1.
