Gene detail

Detailed information of XP_065642617.1 in Hydra vulgaris

Genomic Location: NC_088920.1:22464783...22485960
NR annotation: XP_012556436.1, beta-galactosidase-1-like protein 2 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_065786545.1

ttatgtaaaaattttgttgaatttagaaaattatgtaaaatacttttACCATGCTAGTGTCTTATAGTTGGATAAAGATGGTTATCACTGTTGGGATTTTGATGTGTGTTTGtgcatatttgtttttattctcatCATTTGAAATGACTTCAGatgcaaataaaattcaagctccagaaggtttaaaaataaatggtagaAATTTCACATTAAAGCGTGAGAAATTTAGAATAATGAGTGGATCCATGCACTACTTTAGGATTCCATTCAGAAAATGGTCTGATcgcttattaaaattaaaggcAATGGGATTAAATACAGTGGACATCTACATCCCTTGGAATTTGCACGAACCTGAACCAGgttattttgattttagcagtgatcaattaaatttaagtgAATTTTTGTATCTGTTGCAAGGTTATGGTTTGTATGCTATAATTCGTCCAGGACCTTACATATGTGCAGAATTGGATCTAGGTGGTTTACCtagTTGGTTACTTAGAGATAAAAACATGAAATTGCGATCATTATATCCTGGATTCATTGAGCCAGTTGAAAGATATTTTAAGCAATTGTTTGCAATTTTGCAGCCTTTTCAATTCAGCTATGGGGGACCAATAATTGCATTTCAGATTGAAAACGAATATGGTGTTTATGATCATGATAGTAACTACATGAAATATCTTAAGGAgatttatatttctAATGGATTGAGTGAATTGTTTTTTGTGTGTGACAATAAGCAAGGACTTGGAAAATATAAACTAGAAGGAGtattacaaacaataaattttatgtgGTTAGATGCTAAAGGGATGATTGACAAGCTAGAAGCTGTCCAGCCAGATAAACCTGTATTTGTGACAGAACTATGGGATGGTTGGTTTGATCATTGGGGAGAAAATCACCATATTGTTAAAACAGCAGATGCTGCATTAGCATTAGAGTATGTTATTAAGCGAGGAGCctcttttaacttatatatgTTTCATGGTGGTactaattttagatttattaatgGTGCAAATGCAAATAACGATGGTTTAAATTATCAGAGTACTATTACAAGTTATGACTACGACGCTCCAGTTTCAGAAACAGGATGTTTAAGCCAAAAGTTTGAAGAACTTaagttaacaattaaaaataatgcaccAAAGGGTGCAGtaCCAAAAACTTTACCATGGATACCAGATGATTCTCCTTATACTGGTTATGgTATGATCAAGTTGACAACACAAATGGATTtatctgaaattttaaaacatgtgaattttaaaaaatatcaacttgtTGTAAACATGGAAAATCTTTCCATAAATAACTATCAGGTCAGTCTTTTGGATACATTGTCTATGAGAATAGATTTCAAAACGCAAAAGATGCAGCATTGTTCATTGAAGAAGctagagattttatttttAGTATCTTTGTATGAGATTATATCaaaatccaaatttttattgattctaGATGCAAATGTTGGCAAATTAAAATCATTCTCAAATACATCTTTGaactttttgttaagtgATTTTTGGAGTTTCGATTCTGAAATAAATGTATTCATTGTTTCTCCAGAACATAGTATCAATTGCATTGACATTGTTCCAGATATTCATAAATTTCTCATTTTAGCAAGTGATGGTTTGTGGGGGGTAATGAATGCAAAGCAGGCTGTAGACATAATAACAAACTACGAAAGAAACGCAGATGAAATGCCCTTAGAAAGAAACTGCGCAACtgtactaTGCAACCAGTCACTGGAGTTCTGGAAAAAACGTCATTGTCGGACTGTCAACATCTCCGCTGTTATACTGTTTTTTGATGAAGAGTTTGGCAGTTGTGATCCTTTGTACCATGATTCAGAAAATAGTACTTTAAGTTTAGAGGATGAGGAAGATACACCGCCATTATTTGATACTTTACCCCTAcAAAACCATATAGGGGCTATTCAAATAATACGTGACATTCTTATATGGGGTGGAGGTGTTTGA

Protein

Uniprot

Uniprot term	Description
Q3UPY5	Beta-galactosidase-1-like protein 2 OS=Mus musculus OX=10090 GN=Glb1l2 PE=1 SV=1
Q8IW92	Beta-galactosidase-1-like protein 2 OS=Homo sapiens OX=9606 GN=GLB1L2 PE=1 SV=1
A2RSQ1	Beta-galactosidase-1-like protein 3 OS=Mus musculus OX=10090 GN=Glb1l3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00481	PP2C	Protein phosphatase 2C	Family	Interproscan
PF01301	Glyco_hydro_35	Glycosyl hydrolases family 35	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001932	Domain	PPM-type phosphatase-like domain	Interproscan
IPR001944	Family	Glycoside hydrolase, family 35	Interproscan
IPR031330	Domain	Glycoside hydrolase 35, catalytic domain	Interproscan
IPR019801	Conserved_site	Glycoside hydrolase, family 35, conserved site	Interproscan
IPR036457	Homologous_superfamily	PPM-type phosphatase-like domain superfamily	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23421	BETA-GALACTOSIDASE RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0004565	Molecular Function	beta-galactosidase activity	Interproscan
GO:0005773	Cellular Component	vacuole	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25543	GLB1L; beta-galactosidase-1-like protein	EC:3.2.1.-	Enzymes with EC numbers	-	deepkoala