Gene detail

Detailed information of XP_065646590.1 in Hydra vulgaris

Genomic Location: NC_088921.1:29320303...29352399
NR annotation: XP_012563097.2, calcium-binding mitochondrial carrier protein SCaMC-1 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_065790518.1

GTCTATTATCTGGCCATACTGActcacattttaaattttgtatattcGAAGTGATTTTTTGTTCCCTTTgacaaaaaaatcatcagtCGTTTGAAGTTTTCCCGAAAATACTTACTTGTGTAAAGATGtagaaagttaaaagaaaatgtgATTTACTTTGCTCAAGAGAGTTACCATTTTCAAATCACTTCTTGcaatatatttatcattttacaATTCCCTGCtacttaaaacaattaataCCAGATCGATGTTGACTACCAATGGAACGATGGATCCAGTTATCATGACGTTAAGAGCTTTTTATGACACAAGTGTTGTTTGGAGTCAGATCGACTTCATATATGCTGATATAACTACCCCGAAAATCAACATCCTTGAATCCATGCGCATGTTGACACGTGGTTTAATTGATGAAAACCTTGCAGTTGATGATTATGCAAACATAAATGTGAGATTTGTACAAGTGAAGCAAATGATACTAAAGATCGAATAATTCTGAGTTCCATGTAATTAAAGACTGTATTGTTGAAAAAGTGAAGACGAGGAGGTAGAGAAATAGTCAAACGATGTGCCtccagaaaattattttacgtGCAATAGATCTGTAATTTATGAACGATGGTCTCTTTTTGACAACAGTTAAAACGAAATCAGACAACCATTGAGTCTTAAATGGAAGAGATTTGATAAACAAAAGAACACAAAAatgtacaacttttttttcaaaaactgtaaGAACTTGTTATTTCACATATTCgaagtatatttttattccCCGCGAAGGTTCAAATAACCGGGATTCTCCTGTATTTGAGCAATTTTCTTACAGAActgaagttgaaaaaaaaaaccattcttttttaaaaaaaaacaacaacagacCTTTAGTAGAACAGTCTGTGTATGGACTATATGGACTATGGACATATGGAAACCAAGCTTTAGGAAATCATCTCGTAAAATTTAACGATTAATACAAATTTTGATTGTTACGCTGTTTGTATCCACAACAAAATGGCTGTTGAAAATTTTGTGGAGGAAATAAGCGACATTTATAACATAGATAAGAATGAAGTTTATGAACTATTCCGCGAACTTGATGAAAATGGTGATGGTCGTATTGATGTTCATGAGCTATCTAAGGGCTTAAAGAGGCTTGGTGTTCTTTATGTTCCAGAACATGCTCAGaaaataattGACAGTGGTGACGTTTCAAGCGACAATCAATTGTCGCTTGAAGAATTCTTGAACTACTATCAAGAACACGAACATAAATTGTGGttgatatttaaaagtattgactCAAATAATTCTGgtactGTTTCACGTGATGAGTTAGAAAATGCTCTACGTAAATTAGGTGTTAACGTCGAAAGCAAACAAGTTAATGTTCTCTTTAACAAaATGGATGCAAATGGCTCGTTGCAAATTGATTGGAACCAATGGAAAAAGTTTCACTTTTTGAACCCAGATACAAAGGATATAAAAGATATGGTTAAGTTCTGGAGACATTCAGGTtttattgaTATGGGTGACGATATGCTCGTTCCTATTGACTTTACTGATGAAGAAAAACGAACAGGAATGTGGTGGAAGCAGCTACTTGCTGGAGGTGTTGCTGGAGTCgTTTCACGGACATTCACTGCTCCTTTAGACAGGCTAAAGGTTTTGCTACAGaTTCAGTCTGGAAACAAAACATGGTCCATTTCACGTGGTTTCTCAAAAATGTATACTGAGGGTGGACTGAAATCTTTGTGGCGTGGGAATCTTGTTAATTGTGTTAAAATTGCTCCAGAAtcttctattaaattttttgcctATGAACGtattaaaaagttatttacaaatagtaactACCAACTTGGTGTTCAAGAAAGATTCTTGGCTGGTTCATTGGCTGGTATATGCTCACAGTTCTCCATTTACCCCATGGAAGTCATGAAAACTCGATTAGCAATTTCTAAGACTGGTCAATACAATGGCTTTTTTGATTGTGCTGGACAGATATATCGACAAAATGGTATCAAAGGTTTTTACAAAGGTTTAGTGCCTGGTTTGATAGGAGTTATACCATATGCTGGAATTGACTTATGTGTTTATGAAaccTTAAAGTCCAACTGGTCcaacaaacataaaaatgaaaataatccAGGTGTTGGTGTTATGCTACTTTGTGGTGCTATTTCGTGCACATGTGGCATGTGTGCAAGTTATCCATTGTCTCTTGTGCGTACAAAGTTACAAGCTCAGTctaATGATCCACATTTCGAAGGTCATCGCGCTAAAGGTACGATGGACATGTTTCGATTGATCATCTCAGAAAACGGTGTTGCAGGATTATATCGTggcatttttcctaattttttaaaagttgctcCTGCAGTAAGCGTTAGTTATGTGGTATATGAATTAACCAAAAGAGCTCTTGGTATGTCGTAATTAGTATTAACTCTTATTGTATATTTTGACGAATCAAAGCGAAAACACTTTAAACAAAGACACTTTAAATCGATAGAGCACGAAAAAGTAAACTTATCAACAAACATTCTAGTATTTTAAAGAcactaaaattcattttgctGCTTTGTATTTTGTTAGAAGACCATTGTTAAAACGAGTTCACGCTTGAAATAGTTTTACGTTGGCGAGTTAGTctattaaatttgtaacattAGATCATTGTCTAATATCTAGTgaatttctattgtttttacagttgtattgtaaaaaatattttttattgtttttaggaATTAATGTGTATTTATAGGATTTTTTGAGTCAGTCATTAAAGATAgcaaaa

Protein

Uniprot

Uniprot term	Description
Q8BMD8	Mitochondrial adenyl nucleotide antiporter SLC25A24 OS=Mus musculus OX=10090 GN=Slc25a24 PE=1 SV=1
O18757	Mitochondrial adenyl nucleotide antiporter SLC25A24 OS=Oryctolagus cuniculus OX=9986 GN=SLC25A24 PE=1 SV=1
Q6NUK1	Mitochondrial adenyl nucleotide antiporter SLC25A24 OS=Homo sapiens OX=9606 GN=SLC25A24 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002167	Family	Solute carrier family 25 member 16-like	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002067	Family	Mitochondrial carrier protein	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24089	SOLUTE CARRIER FAMILY 25	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005347	Molecular Function	ATP transmembrane transporter activity	Interproscan
GO:0015866	Biological Process	ADP transport	Interproscan
GO:0015867	Biological Process	ATP transport	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14684	SLC25A23S; solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41	-	Transporters	ko02000	deepkoala