Gene detail

Detailed information of XP_065647225.1 in Hydra vulgaris

Genomic Location: NC_088921.1:47645854...47662913
NR annotation: XP_002154954.2, xylosyl- and glucuronyltransferase LARGE2s [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC100213659

ATGGTTAGAAGATGTCGTTTTAGTAAACTCATCAATAAGTTGGTTATACTTTCTGTGTCTTGTTCTGTATTGTTAATTTTATGGAGTTTAATTCTTGACAATCTAGTGAAAAAAAATAACAAGCACACAGAAGAGAGTAATGGAGTAACAATAAAGAATGACAATCAAGATAAAAATGTATTAAAATTTCAAACAACATTTCACTTTTCTGATCCTTTAGAAAAGGATGATAAACTGACATATGATCAAGTAAATTTGTTGACAAAGGAGTTACAGTATACGCAAGAAATTGTCAATGAATTAAAAAATGCAAAGTTTTTAAAAAATGATTGTAAAACATTTCAACTGCCTGACTGTCAGGTCATTCATATTGCAATCATATGCGCTGGTTACAAAGAAACTAAGCGTGTTGTAACGCTTATAAAATCTATTTTGTTCTATCGACGGCATCCACTTCACTTTCACTTTATATCAGATATTAGTGGAAGACATGTTTTACAAGTTTTGTTTAAAACATGGATGTTAAAGCAAGTTGGAGTAAGTTTCTATGACGCAGAAAAACTGAAAGCAGATGTTGATTGGATTCCAAATACTCATTACTCCGGCGTTTATGGACTTATGAAGTTGACTTTGACTAGGGCTCTTCCAGAGTTCTTAAGCAAGGTCATTGTACTTGATACAGATGTATTTTTCTTGACTGATTTAGCTGAACTATGGGCTTTCTTTAATAATTTTACAGAAGATCAGGCAATTGGTTTGGTCGAAAACCAGAGCCAGTGGTATACTGGAAAACTTTGGAAGAAATATAAAATATGGCCTGCTATAGGCCGAGGTTTTAATACTGGTGTAATGTTGTTTGATTTACAAAAACTACGTAAGTTTCAATGGGCTAACCTTTGGAGAATGACCGCAGAAAAACAACTTTTGAATTTGTTTTCAACTGTTCTTGCTGACCAAGATGTTATTAATGCAGCTCTGAAGGACAATCCTCAAATTGTTTACAAACTTCCATGTCAATGGAATATCCAATTAAGTGATAATACAGAGAGTGAGTATTGCTATAATGAACTAATTGAACTAAAGGCCATTCATTGGAATTCACCAAACAAACACACTGGCAACAAACTAAAACATGTGGAATATTTTAGAAACATGTATCTTACTTTTCTTGAATACAATGGAAATTTGCTAAGAAAAAGTATTTTTTCCTGCCTTATTCCTGGAGAAAATGCAACAGAAACAAGCAGAGAAAAAAAGTTATCAGATAATGATCAATGTTATGATATTAAAATAGAGCAGTCAACAACAAGACGTGTACATTTGTATTATATGGACTATGATTATAAACCTGAAGTTGGAGATGTTACTTTGATGACTCACCTATCTATGGATAGAATACAGATTTTAGACTTGTTATCGCAACATTGGGAAGGTCCAATGTCGATTTCATTATATGCATCTGATGCAGAAGCTCAGCAGTTCACACGTTATTCTTCTGTTTCTAGTTTTTTGAGAAAAAGAAAGAATATAGGACTGCACATCGTTTATAAAGATGGAGATTTATATCCTGTGAACTACTTACGAAATGTTGCACTTGAACATGTACAAACAACTTATGTTTTCCTTAGTGATATTGATTTCTTACCCATGATAGGATTATATAACTACTTAAGAGGACTTGCAAACATTACAAATATGGAGAAAAAGGCTGTAGTTGTTCCTGCATTCGAAACATATCAATATAAACTTGATTATCCTCTAAGTAAAAAGCAGCTTATTGAGTATTGGGGTTCACAGAAAGTTGACACTTTTAGGGGAGAAGTTTGGCAACAAGGTCATGCGGCTACTGATTTTCAACGCTGGAAAACAAGTTCAACTGACTATGAGGTTCGTTGGGAAGTAGATTTTGAACCATACATTCTAGTTAAGAAGAGTAGTGTACCTTTATATGATATGCGCTTTGTCGGTTTTGGTTGGAATAAAGTTTCTCATATTATGGAGCTTCATGCATTGCGGTTTAAGTTCGTTGTAGCTGCAAACGGCTTTATCGTACATATGCCACATGCACCATCAGTTGATATTACTAAATATCGTTCAAGTAGCTTATACCGGAGATGTTTGGGTCTCCTCAAGAAAGAGTTTCAATATGAGCTTGAACGGAAGTACAACATCGAGTTTCAGTGA

Transcript

rna-XM_065791153.1

taaaaagtttgttgatttatttatgCTAAGTATATATGTTCTCAAAAAACACttaggaaaatatttaaaagagcttTCTTGAAAGAGAATGATTGATCATGGTTAGAAGATGTCGTTTTAGTAAACTCATCAATAAGTTGGTTATACTTTCTGTGTCTTGTTCtgtattgttaattttatgGAGTTTAATTCTTGACAATctagtgaaaaaaaataacaagcacACAGAAGAGAGTAATGgagTAACAATAAAGAATGACAATCaagataaaaatgtattaaaatttcaaacaacatTTCACTTTTCTGATCCTTTAGAAAAGGATGATAAACTGACATATGATCAAGTAAATTTGTTGACAAAGGAGTTACAGTATACGCAAGAAATTgtcaatgaattaaaaaatgcaaagtttttaaaaaatgattgtaaaacATTTCAACTGCCTGACTGTCaggtCATTCATATTGCAATCATATGCGCTGGTTACAAAGAAACTAAGCGTGTTGTAACGcttataaaatctattttgttCTATCGACGGCATCCACTTCACTTTCACTTTATATCAGATATTAGTGGAAGACATGTTTtacaagttttgtttaaaacatgGATGTTAAAGCAAGttGGAGTAAGTTTCTATGACGCAGAAAAACTGAAAGCAGATGTTGATTGGATTCCAAATACTCATTACTCCGGCGTTTATGGACTTATGAAGTTGACTTTGACTAGGGCTCTTCCAGAGTTCTTAAGCAAGGTCATTGTACTTGATACAGATGTATTTTTCTTGACTGATTTAGCTGAACTATGGgctttctttaataattttacagaagatcagGCAATTGGTTTGGTCGAAAACCAGAGCCAGTGGTATACTGGAAAACTTTggaagaaatataaaatatggcCTGCTataggcCGAGGTTTTAATACTGGTGTAATGTTGTTTGATTTACAAAAACTACGTAAGTTTCAATGGGCTAACCTTTGGAGAATGACCGcagaaaaacaacttttgaatttgttttcaACTGTTCTTGCTGACCAAGATGTTATTAATGCAGCTCTGAAGGACAATCCTCAAATTGTTTACAAACTTCCATGTCAATGGAATATCCAATTAAGTGATAATACAGAGAGTGAGTATTGCTATAATGAACTAATTGAACTAAAGGCCATTCATTGGAATTCACCAAACAAACACACTGGCAACAAACTAAAACATGTGGAATATTTTAGAAACATGTATCTTACTTTTCTTGAATACAATGGAAATTTGCTAAGaaaaagtattttttcctGCCTTATTCCTGGAGAAAATGCAACAGAAACAAGCagagaaaaaaagttatcagATAATGATCAATGTTATGATATTAAAATAGAGCAGTCAACAACAAGACGTGTACATTTGTATTATATGGACTATGATTATAAACCTgaaGTTGGAGATGTTACTTTGATGACTCACCTATCTATGGATAGAATACAGATTTTAGACTTGTTATCGCAACATTGGGAaggtCCAATGTCGATTTCATTATATGCATCTGATGCAGAAGCTCAGCAGTTCACACGTTATTCTTCTGTTTCTagttttttgagaaaaagaaagaatataGGACTGCACATCGTTTATAAAGATGGaGATTTATATCCTGTGAACTACTTACGAAATGTTGCACTTGAACATGTACAAACAACTTATGTTTTCCTTAGTGATATTGATTTCTTACCCATGATAGGATTATATAACTACTTAAGAGGACTTGCAAACATTACAAATATGGAGAAAAagGCTGTAGTTGTTCCTGCATTCGAAACATATCAATATAAACTTGATTATCCTCTAAGTAAAAAGCAGCTTATTGAGTATTGGGGTTCACAGAAAGTTGACACTTTTAGGGGAGAAGTTTGGCAACAAGGTCATGCGGCTACTGATTTTCAACGCTGGAAAACAAGTTCAACTGACTATGAggttCGTTGGGAAGTAGATTTTGAACCATACATTCTAGTTAAGAAGAGTAGTGTACCTTTATATGATATGCGCTTTGTCGGTTTTGGTTGGAATAAAGTTTCTCATATTATGGAGCTTCATGCATTgcggtTTAAGTTCGTTGTAGCTGCAAACGGCTTTATCGTACATATGCCACATGCACCATCAGTTGATATTACTAAATATCGTTCAAGTAGCTTATACCGGAGATGTTTGGGTCTCCTCAAGAAAGAGTTTCAATATGAGCTTGAACGGAAGTACAACATCGAGTTTCAGTGATAATCTTTTCAAACTGTTATTTAATCGTTTAGATTTAGTGTTGCTTATACTAGAAAAATACttatatagatataattttagctatatttaagttatatttattttctgtatttatttttttttaaagagattttatttgaata

Protein

Uniprot

Uniprot term	Description
Q66PG1	Xylosyl- and glucuronyltransferase LARGE2s OS=Danio rerio OX=7955 GN=large2 PE=2 SV=1
Q66PG2	Xylosyl- and glucuronyltransferase LARGE1 OS=Danio rerio OX=7955 GN=large1 PE=2 SV=1
Q66PG3	Xylosyl- and glucuronyltransferase LARGE1 OS=Gallus gallus OX=9031 GN=LARGE1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01501	Glyco_transf_8	Glycosyl transferase family 8	Family	Interproscan
PF13896	Glyco_transf_49	Glycosyl-transferase for dystroglycan	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051292	Family	Alpha-1,3-xylosyltransferase/Beta-1,3-glucuronyltransferase	Interproscan
IPR002495	Family	Glycosyl transferase, family 8	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12270	GLYCOSYLTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015020	Molecular Function	glucuronosyltransferase activity	Interproscan
GO:0035269	Biological Process	protein O-linked mannosylation	Interproscan
GO:0042285	Molecular Function	xylosyltransferase activity	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09668	LARGE; glycosyltransferase-like protein LARGE	EC:2.4.2.- EC:2.4.1.-	Glycosyltransferases	ko01003	deepkoala