Detailed information of XP_065648003.1 in Hydra vulgaris

Genomic Location: NC_088922.1:41278266...41279592
NR annotation: XP_012566941.2, homeobox protein mab-5-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P81192Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=187800 GN=HOXA4 PE=3 SV=1
Q9IA25Homeobox protein Hox-A7 OS=Heterodontus francisci OX=7792 GN=HOXA7 PE=3 SV=1
P10038Homeobox protein mab-5 OS=Caenorhabditis elegans OX=6239 GN=mab-5 PE=2 SV=3
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR050296FamilyAntennapedia-type homeoboxInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45659HOMEOBOX PROTEIN HOXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952Biological Processanterior/posterior pattern specificationInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

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