Gene detail

Detailed information of XP_065649302.1 in Hydra vulgaris

Genomic Location: NC_088922.1:40899139...40942751
NR annotation: XP_047128851.1, ABC transporter G family member 22 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_065793230.1

ttttatatagaatcTAAAAGTAGTTTATTTTGTGCACCTAAAACAAACAAagttaacaaacaaacattttatatatggCAGCCTTTAGAAATAAGGAAGAAATTTGCATAAAGTTTATTGATCTTCATGTTCGTGTTGgttcaaaagatattttaaagaatgtcTGCGGAGAAATAAATCCAGGAGAAGTGTTTGCCATTATGGGACCATCAGGTGCTGGCAAATCAAGCCTTCTAAACTTACTTGCTGGCAGAAAAAGAAAAGGAGTTTTGAGCGGtggtttaattttaattaatggaGAGAACTATTCAAAGTTGCTTCGAAGAAAAATTGGATATGTAATGCAAGAAGACATCTTTTTTCCAAATCTTACTATCAGGCAAACTTTAGAAtttgtagGTAAAATCAGACTCCCTGACAGCATGAAGTGGTGTGAAAAACTTGCTGTTGTTGACAAAGTGATCGACGATCTTGGTCTACGTAAATGTGAAAACACTGtgatagGTGACAGTCACAATCCGCATGGATGTTCAGGGGGTGAAAGAAAACGTTGCAGTATTGCTGTAGAGCTCATTACTAATCCTGCATGCATAattttagatgagCCAACTACTGGTTTAGATTCTTCTACAGCATTCAATCttataaaaactcttaaaaatctTGCCTTAAAAGAAAACCATGCCATTTGTGTAACTATTCACCAACCTTCTAGTCAAGTGTTTCACATGTTTGACAAACTGATGTTGCTATGCAATGGAACGgttatgttttttggaaaaaatgcaCATGTTTTGCCTTTTTTTGAATCGATTGGATTGTCTGTCTACCCTAATTGGAATCCTGctgatttttttattgagaaACTCAAGAAAACTGATGTTCAAGCAAAAATGATTGAAGGATTCAAAATGTTCCAAAGCAATATGGTTCAAGAAAGTAACTGTGTGGCAACAGAAATTATTCATAATGCATTTGAAAATAATGCTAATGATAAATGCAAAATTGCAGACATTCAAGTAGATAATCAAACACAGGCAACTAGAAAatattcaCAAATTGAAATCGTTAGAAATAAATGGCCAACTTCATACCAGACTCAAGTATTGGCTTTGTGGAATCGATCATTTGTTCAATCAAAAGGAGATATTTTTAATGCAGTTTACTTTACACAGGCAATTCTAGCTTGCATAATTATTGGACTATTGTGGTTTAATACACCTTATGATGCAGATTCTAGTGTTGATCGTGAAGGATCGattttttttgtgatgacTTATTTGTTCATTGAGGTGGCATTTGGAACTATATTTTCatTTCCTTTTGAGAATAAAGTGATTGCAAAAGAAAGGGCAGCAGGAATGTATCATTTATCTGCATTTTACACTGTAAAAAATACAGTTGATTTATCTATTCTTGTTGTACCTCAATTAATGATATACACAATAACATACTGGGTGATTGGACTGAATCGTTCCCCAATTTTCTTGCTCGGCCtactaaatgtatttttaatgacAGCTGTTTCTCAGTCTGTGGGGCTTATCATTGGTGGCAGCGTTAAAAGCCTTCATaaatgtattcttttttttgttataattggcATTGGTGGACAACCGCTGGCaggtttttttacaaagaaGTTGCCTACATGGCTTTCATGGATTCGATATATTTCTGTTTACACCtacttttacaatgtttttataagaaTGGAGTTTGAATACGCACAGGAAGTTTTCAAGTGCACTACAAATTCTGAATACCGTGAATGCTTCTACAACAACCGAACTAATATTACTGGTCCAGAATTGCTATCTTACATAGATCCCATTCCTTTAAATATTCCACAAACAATaggttttataatatttttgacttttttcctTCGAGTAGTATTTTATTACGTGCTAAAATATTgccgaaaaacaaaataaattctttttataaaaaaaattgttgaacaCACGcaatagtaatttttttcggTTTTGCTTTTTCTAACGCAATTCTTCTAGCTAGTGGTCTTAAAAAGAGTCTCCGCCTACAAGcaatgataatttaattattattttgtattttttggttaaatatatagtattaaaattattacaaaagtttcataaattgtttgtttttatttaacttgaataaaaacgaaaaagttaaaataaaataaaatttaat

Protein

Uniprot

Uniprot term	Description
Q93YS4	ABC transporter G family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCG22 PE=1 SV=1
Q9FT51	ABC transporter G family member 27 OS=Arabidopsis thaliana OX=3702 GN=ABCG27 PE=2 SV=1
Q9LK50	ABC transporter G family member 26 OS=Arabidopsis thaliana OX=3702 GN=ABCG26 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF19055	ABC2_membrane_7	ABC-2 type transporter	Family	Interproscan
PF01061	ABC2_membrane	ABC-2 type transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050352	Family	ATP-binding cassette subfamily G transporters	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR043926	Domain	ABC transporter family G domain	Interproscan
IPR013525	Domain	ABC-2 type transporter, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48041	ABC TRANSPORTER G FAMILY MEMBER 28	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05681	ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2	-	CD molecules	ko04090	deepkoala