Genomic Location: NC_088924.1:12011629...12094390
NR annotation: XP_047125332.1, nephrocystin-3 [Hydra vulgaris]
| CDS | ||||
| LOC136071859 | ||||
| Transcript |
| rna-XM_065797385.1 |
| Protein |
| XP_065653457.1 |
| Uniprot term | Description |
|---|---|
| Q7TNH6 | Nephrocystin-3 OS=Mus musculus OX=10090 GN=Nphp3 PE=1 SV=2 |
| P0CI65 | Nephrocystin-3 OS=Danio rerio OX=7955 GN=nphp3 PE=3 SV=1 |
| Q6AZT7 | Nephrocystin-3 OS=Xenopus laevis OX=8355 GN=nphp3 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13181 | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR051191 | Family | DDB1-CUL4-associated factor 12 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19860 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0080008 | Cellular Component | Cul4-RING E3 ubiquitin ligase complex | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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