Gene detail

Detailed information of XP_065653517.1 in Hydra vulgaris

Genomic Location: NC_088924.1:13955598...13959235
NR annotation: XP_002165028.2, heat shock protein HSP 90-alpha [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC136080595

ATGGTTGAAGGTGGTGAAATTGAAACTTTCGCTTTTCAAGCAGAGATAGCTCAGCTAATGAGCTTGATTATTAACACGTTTTACTCTAACAAAGAAATCTATTTGCGAGAGTTGATTTCTAATGCTTCAGATGCGTTAGACAAAATCCGTTACTTATCACTAACCGATCCGGCTGTTTTGGATTCTGGAAGTGAATTAAAGATCGACATTATTCCAAATAAGGAAGAAAAAACCATTACTATTTTTGACACCGGTATTGGTATGACAAAAGCAGACCTTGTCAACAATCTTGGCACAATTGCTAAATCAGGTACAAAAGCATTTATGGAAGCTCTTCAAGCTGGAGCAGATATATCAATGATAGGACAGTTCGGTGTCGGGTTCTATTCAGCATATCTGGTTGCTGATAAAGTGGAAGTGATAACTAAAAACAATGATGATGAGCAATATATATGGGTCTCATCCGCTGGTGGCTCATTTACTGTACAAAGAGACACAGTCAATGAACCTCTTGGTAGAGGAACAAAAATTATACTGCACATGAAAGAAGATCAGCTAGACTTTTCTGAAGAAAAAAAAGTAAAAGATATCATTAAAAAACACAGTCAGTTTATTGGATATCCAATCAATTTGAGAGTTCAGAAAACTAGAGACAAGGAGGTTTCTGATGATGAAGCTGAAGATGAAGAGAAGAAAGATAAATCTGAAGAAAAAATGGAGGATGAAGATGAAGATGAACCTAAAATAGAAGATGTTGGTGATGATGCAGAAGCTGAAAAAAAAGACAAAAAGAAAAAAAAGAAAATAAAGGAAAATTATACTGAAATGGAGCAACTCAACAAAACTAAACCCCTGTGGACTAGAAACCCAGATGATATTAGCTCTGAAGAGTATGCTGATTTTTACAAAAGTTTGACGAATGATTGGGAGGAGCATCTTGCAGTAAAGCATTTCTCTGTTGAAGGTCAACTTGAGTTTAGAGCAATCTTATTTGTTCCCAAGAGGGCTCCATTTGACTTGTTTGAAAATAAAAAACAAAAAAATTCAATTAAATTATTTGTCAGAAGAGTTTTTATAATGGAAAATTGCGAGGAAGTAATGCCTGAATGGCTCAACTTCGTCAAAGGTGTGGTTGATTCTGAAGATTTGCCTCTTAATATTTCCAGAGAAATGTTGCAACAGAGTAAAATATTAAAAGTTATTCGTAAGAACCTTGTAAAAAAGTGCTTAGAACTTTTTGTTGAGATTTCAGAGGATAAAGATAATTATAAAAAGTTTTATGAACAATTTAGTAAAAACATTAAGTTAGGTATACACGAGGACTCTCAAAATCGTTCTAAAGTTGCTGATTTATTGAGATATCATTCTTCAGCGTCTGGTGATGATATGACATCCCTAAAGGACTATGTTTCTCGTATGAAAGAGAATCAAAAAGACATTTATTATATAACTGGAGAAAGCAAGGAAATTGTTTCAACTTCTGCTTTTGTTGAGAAAGTTAAAAAGAAAGGTTTTGAAGTTCTATATCTAATTGATCCAATAGATGAGTATGCTGTTCAACAACTTAAAGAATATGATGGTAAAAAATTAGTTTGTGTTACTAAAGAGGGATTAGAATTACCAGTTAGTGATGATGAGAAGAAGAGACAAGAAGAATTAAAAGCTAGTTTTGAGGAGCTATGCAAGGTTATAAAAGATATATTAGATAAACGTGTTGAAAAAGTCACTGTCTCTAATCGCTTGGTTGATTCACCATGTTGCATTGTTACTAGTACTTATGGATGGTCAGCAAATATGGAAAGAATCATGAAAGCGCAAGCGCTTCGTGATACAAGTACAATGGGTTACATGGCAGCTAAAAAACATCTTGAAATAAATCCAGAGCATAGTATAATGGTTGCCCTTAAAAAGAAAGTTGATGCAGATAAAAATGATAAATCAATAAAAGACTTGATCGTTTTGTTATATGAAACATCGCTTCTGTCGTCAGGTTTTTCGCTTGAGGATCCTCAAAATCATGCTGCTCGCATTCATCGCATGGTCAAACTCGGTTTAGGTGTTGATGAAGACGAAAGTGCCGTAGAGGAAATGGCAACAGACGATGTGCCACCTCTCGAAGGTGATTCGGAAAAGGATGAAGATAAAGCCAGAATGGAAGAAGTTGACTAA

Transcript

rna-XM_065797445.1

AAACTTGTAAAGTGCTCTAAGAAGACTTCTTGTGAAATACGCTCTACATTAAAAAATGGTTGAAGGTGGTGAAATTGAAACTTTCGCTTTTCAAGCAGAGATAGCTCAGCTAATGAGCTTGATTATTAACACGTTTTACTCTAACAAAGAAATCTATTTGCGAGAGTTGATTTCTAATGCTTCAGATGCGTTAGACAAAATCCGTTACTTATCACTAACCGATCCGGCTGTTTTGGATTCTGGAAGTGAATTAAAGATCGACATTATTCCAAATAAGGAAGAAAAAACCATTACTATTTTTGACACCGGTATTGGTATGACAAAAGCAGACCTTGTCAACAATCTTGGCACAATTGCTAAATCAGGTACAAAAGCATTTATGGAAGCTCTTCAAGCTGGAGCAGATATATCAATGATAGGACAGTTCGGTGTCGGGTTCTATTCAGCATATCTGGTTGCTGATAAAGTGGAAGTGATAACTAAAAACAATGATGATGAGCAATATATATGGGTCTCATCCGCTGGTGGCTCATTTACTGTACAAAGAGACACAGTCAATGAACCTCTTGGTAgaggaacaaaaattatactgCACATGAAAGAAGATCAGCTAGACttttctgaagaaaaaaaagtaaaagatatcattaaaaaacacAGTCAGTTTATTGGATATCCAATCAATTTGAGAGTTCAGAAAACTAGAGACAAGGAGGTTTCTGATGATGAAGCTGAAGATGAAGAGAAGAAAGATAAATCTGAAGAAAAAATGGaggatgaagatgaagatgaacCTAAAATAGAAGATGTTGGTGATGATGCAGAAGctgaaaaaaaagacaaaaagaaaaaaaagaaaataaagGAAAATTATACTGAAATGGAGCAACTCAACAAAACTAAACCCCTGTGGACTAGAAACCCAGATGATATTAGCTCTGAAGAGTATGctgatttttacaaaagtttgacgAATGATTGGGAGGAGCATCTTGCAGTAAAGCATTTCTCTGTTGAAGGTCAACTTGAGTTTAGAGCAATCTTATTTGTTCCCAAGAGGGCTCCATTTGacttgtttgaaaataaaaaacaaaaaaattcaattaaattatttgtcaGAAGAGTTTTTATAATGGAAAATTGCGAGGAAGTAATGCCTGAATGGCTCAACTTCGTCaaagGTGTGGTTGATTCTGAAGATTTGCCTCTTAATATTTCCAGAGAAATGTTGCAACagagtaaaatattaaaagttattcgtaAGAACCTTGTAAAAAAGTGCTTAGAACTTTTTGTTGAGATTTCAGAGGataaagataattataaaaagttttatgaacaatttagtaaaaacattaaGTTAGGTATACACGAGGACTCTCAAAATCGTTCTAAAGTTGCTGATTTATTGAGATATCATTCTTCAGCGTCTGGTGATGATATGACATCCCTAAAGGACTATGTTTCTCGTATGAAAGAGAATCAAAAAgacatttattatataactgGAGAAAGCAAGGAAATTGTTTCAACTTCTGCTTTTGTTGAGAAAGTTAAAAAGAAAGGTTTTGAAGTTCTATATCTAATTGATCCAATAGATGAGTATGCTGTTCAACAACTTAAAGAATATGATggtaaaaaattagtttgtgtTACTAAAGAGGGATTAGAATTACCAGTTAGTGATGATGAGAAGAAGAGACAAGAAGAATTAAAAGCTAGTTTTGAGGAGCTATGCAAggttataaaagatatattagaTAAACGTGTTGAAAAAGTCACTGTCTCTAATCGCTTGGTTGATTCACCATGTTGCATTGTTACTAGTACTTATGGATGGTCAGCAAATATGGAAAGAATCATGAAAGCGCAAGCGCTTCGTGATACAAGTACAATGGGTTACATGGCAGCTAAAAAACATCTTGAAATAAATCCAGAGCATAGTATAATGGTTGCCCTTAAAAAGAAAGTTGATGcagataaaaatgataaatcaataaaagacTTGATCGTTTTGTTATATGAAACATCGCTTCTGTCGTCAGGTTTTTCGCTTGAGGATCCTCAAAATCATGCTGCTCGCATTCATCGCATGGTCAAACTCGGTTTAGGTGTTGATGAAGACGAAAGTGCCGTAGAGGAAATGGCAACAGACGATGTGCCACCTCTCGAAGGTGATTCGGAAAAGGATGAAGATAAAGCCAGAATGGAAGAAGTTGACTAAAACGCTGCCTTGCGAAATGTAATTCTAACTTGGTCCCCTAACTTCAGATACAGTTTTAAGTTAACCTGAAGGCGAGATTTAATAATTCGTTTTATTAGTTTCgcgtgtaaataaataaataaaatagatgtTTTTATAATCAGAAAACCAACCGATACATTGCACTACCAAATAAATCAACCTGTATctaaattgtatctaattgtAATCTTGTTTCTATATTGTAATGTAAAAATCTAAAAcgaaagatatttttataaactaa

Protein

Uniprot

Uniprot term	Description
O57521	Heat shock protein HSP 90-beta OS=Danio rerio OX=7955 GN=hsp90ab1 PE=1 SV=2
Q9GKX8	Heat shock protein HSP 90-beta OS=Equus caballus OX=9796 GN=HSP90AB1 PE=2 SV=3
Q4R4T5	Heat shock protein HSP 90-beta OS=Macaca fascicularis OX=9541 GN=HSP90AB1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00183	HSP90	Hsp90 protein	Family	Interproscan
PF13589	HATPase_c_3	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020575	Domain	Heat shock protein Hsp90, N-terminal	Interproscan
IPR001404	Family	Heat shock protein Hsp90 family	Interproscan
IPR036890	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR003594	Domain	Histidine kinase/HSP90-like ATPase	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR037196	Homologous_superfamily	HSP90, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11528	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0032991	Cellular Component	protein-containing complex	Interproscan
GO:0034605	Biological Process	cellular response to heat	Interproscan
GO:0048471	Cellular Component	perinuclear region of cytoplasm	Interproscan
GO:0050821	Biological Process	protein stabilization	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04079	HSP90A, htpG; molecular chaperone HtpG	-	Exosome	ko04147	deepkoala