Gene detail

Detailed information of XP_065653878.1 in Hydra vulgaris

Genomic Location: NC_088924.1:28081938...28132656
NR annotation: XP_002158977.3, kelch-like protein 2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_065797806.1

GGcgctaaactaaaaaaaattgaactttctTGATGcgctcaacaacaaaaaatgagGACAATAGCtaagtaaacaaacaaaaattacacaTAATGTGTATATTGCTTCAGATATATAGAAAACATGGCGTTTTTATCGCATAAATATACAGGCAGTTGTTCTGGTTTTAGTTTACCTATATTTAAAAACCCATTGCATCTAACAAAATCATTTGACATCCTCTATGCAATGTGGAAACAAAATTTACTTTGTGATGTCACCATATGTGTTGGAAACAAATCTATTGAAGctcatAGGGCAATACTTGCCTCTTCCAGTCCTTACTTTTATGCTATGTTCACAGGAGAGATGTCAGAAAGTAAACAGAACTGCatagttttaaaagaagttgATGCATATGCTTTAGAGCTGCTTATAGATTATTGCTACTCAGGAGAGGTGCAAGTTACTGAAGAAAATGTTCAAgTCTTTGAATCTGTTATTGCGTGGATAAATTATGATCCCTCACAGAGGGACCAGTTTTTACCTGATCTTATGCAGCATGTAAGATTACCTTTATTAGCACGAGACTATTTGGTTGACAGAGTTGCTGCAGAGcctttgattaaaaaaagttttgcgtGTAAAGATTTTCTTATAGAGGCAATGAAGTATCATTTACTACCAAGACCACAAAGGTTATTTTTGCAAACACCAAGGACACGAAGTCGAATACCTGGAATAcctaaaattttgtttgttgttggaGGTCAAGCACCCAAAGCAATTCccagtGTTGAGTGTTATGACTTGCAGTTAGAACGATGGTACAGTGCTGCTGATATGAACTCTCGTCGGTGTCGTGCAGGTGTTGCTGTTTTAAATGGTGTTATTTATGCTGCTGGTGGTTTTAATGGGGCACTACGTGTTCGCTCAGTAGATTCTTATAATCCTCAAAAAGATGAATGGTGTTCGGTTGCTTCAATGGAGGCACGTAGAAGTACTCTTGGAGTTGCAGTTTTGAATGGACTTTTATATGCAGTGGGAGGATTTGATGGCACAACAGGCCTATGCAGTTGTGAGGTTTATGATCCAATAACAAATGAGTGGCGTTTACTAGCTAACATGGGGGTTCGTCGTAGTTCTGTAGGTGTTGGTGTTTTAAATGGTTACATTTATGCAGTTGGGGGTTATGATGGAGCTTCACGTCAGTGTCTTTCCTCTGTTGAAAAATATGACCCTGTGAAAAATGAATGGCAATTTGTAGCTGATATGACTGTTCGAAGAAGCGGTCCTGGAGTATGTGTTTTAGgCGGGTTTTTGTATGCTGTTGGCGGGCATGATGGTCCTCACGTTCGCAAGTCAGTTGAGTATTATAATCCAGATGCCCAAAAATGGGTAACTGTATCTGACATGTCATTGGCAAGACGTAACGCTGGTGTTGCTGCAGTGGACGGTTTTTTGTATGTTGTTGGGGGCGATGATGGTACGATAAATCTGTCTTCAATAGAAATGTATTGCTTTGAAACTGACCAGTGGTCACTTCTCCCTTCCCAGATGAGCGTGGGCAGAAGTTACGCCGGTGTTGTTGTTATTGATAAATCTCTTCACTTTATGTGATTATATGTTGGTAGTCACCTGATTTTCTATACCTAATTGGATCAAGAAAGAAAAGCGTTTGATTACGAtttatattatcatattatGATGGTGTAATAGCAAATATGCGTAAGTCGCTGAAAAACGGTTTTGAGAAAACTTTCTATGATCAGTCATTTCAAATGCTTTTTGAGATTTATGTCTGATCAAAGTAGATTTAGtcaaagcatttatttttgactgaAGTACTTTTGTACTAGGccctttaaatttatttttgaagatattaaaagtattttttgaaagtaaaggTTGATGccgaagaaaaaaatgttaagtagATGTTTTGAACATATAACACGcgatatcaataaaaaaacattttggaaaCAGAAacatatgcttataaaaaaggACTCATTTAGCTTGCATGAACCTTGCATGACCGGACCAAAagctatatatatgtatgttttaatgataatataagCGATGTAAAACTATATAGCTTTATGCaagctgttaaaaaaataattatttttactactgtatttttttttactgctatttttaatttttttttaattaatgcttTAATGTAAGatgttaacaaataattttttttgttattgtattttttatcaatattttttcattttgttattttctcGGTaaaattgtaatcttttttaagattttattaaaatttttgtttta

Protein

Uniprot

Gene family

Uniprot term	Description
O95198	Kelch-like protein 2 OS=Homo sapiens OX=9606 GN=KLHL2 PE=1 SV=2
F1LZF0	Kelch-like protein 2 OS=Rattus norvegicus OX=10116 GN=Klhl2 PE=1 SV=3
Q8JZP3	Kelch-like protein 2 OS=Mus musculus OX=10090 GN=Klhl2 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	ZBTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651	BTB	BTB/POZ domain	Domain	Interproscan
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR011705	Domain	BTB/Kelch-associated	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45632	LD33804P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10443	KLHL2_3; kelch-like protein 2/3	-	Ubiquitin system	ko04121	deepkoala