Detailed information of XP_065654299.1 in Hydra vulgaris

Genomic Location: NC_088924.1:41493031...41513024
NR annotation: XP_002162619.2, LIM domain-binding protein 3 isoform X5 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8CI51PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=4
Q62920PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2
O75112LIM domain-binding protein 3 OS=Homo sapiens OX=9606 GN=LDB3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412LIMLIM domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR050604FamilyPDZ and LIM domain-containingInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24214PDZ AND LIM DOMAIN PROTEIN ZASPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001725Cellular Componentstress fiberInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0030018Cellular ComponentZ discInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0031941Cellular Componentfilamentous actinInterproscan
GO:0051371Molecular Functionmuscle alpha-actinin bindingInterproscan
GO:0061061Biological Processmuscle structure developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19867PDLIM5_6_7; PDZ and LIM domain protein 5/6/7-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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