Gene detail

Detailed information of XP_065656099.1 in Hydra vulgaris

Genomic Location: NC_088925.1:36931626...36934478
NR annotation: XP_025424876.1, zinc finger MYM-type protein 1-like [Sipha flava]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_065800027.1

ATTGTaacttgtaaatttaaattataaaggtTTTACTTTAGTGCGAGTAGtgcgttttatatatatagtttagtgttcgatatttatgtaaaaatggaTCAGAAACGACATATTAGTGGAGCCCAAGCGAGAAAGcgtgtaatttttaaaaaagaaaaagaagtgaTTTTACTTAGTTAAATACCtaggttaaataattttttcaaacaaataaataacatttccCCTAGTTGTGTTGAAGATAATAAACTAGAATCTTCAAATGATATAACTAttacaaataattgttttactaCTTCTATTCAATGTACTGCGTCTTCTTCAGATCAATCAGTTGTTGATGTAAATGAGGAATCAGAAAATCTGAGCTAAATGTCATTCCTAATCCTCTTACGCagaataatacaaataattttaaagatccAGCAGATTGGACAAACAGTAATATATGTCGTAATTATATTGCAAAATTTGGATATGATCAGAACATTGATGCAGATTTTACCTCATCAAAACGATCTTATTCTGATTATGATCGTTATTGTAGTAAATCAATCTTTACGAAAAATCGAAAAAACGGAGAAAATGTTTCACGGAAATGGCTTGtttattcaatttcaaaatttgtattattttgtgcTCCATGCAAATTATTTGGATGCAGTACTCAACTGGGAGATGCTGGATTTAATGATTGGAAAAATGGACATTTACTTATTTCCAGGCACGAAAATTCTTTGgcacataaaaataatacattaagttttattacattacaaAGTGATGTAGGTAGAATTGACACTCAATTGGCAACACAAGTGACTGATTGAATGAATGACTGGAAAGCTGTTCTTCATCGAATTgttgaagtaattaaatttcTCGGTGCAAAAGGTTTATTATTTAGAGGTGATAATgaacaatttaacaaaattaacaatgGGAACTTTTTGGGAACGTTAGAGTTACTTGCTAAATTTGACCCTTTTATTGCTCAACATATAGAAAAATATGGGAATAGAGGGAAAGGAACTCCATCTTATTTATCATCCACAATCTATGAAGAACTTTTACTTTTGATGAAgaatgatataattaaaattatattaaaagaattaaaagcaGCCAAGTATTATTCTTTAATTGTTGATTCTACACCTGATATAGCAAACGTCAATCAACTTGTTATTGCATTAAGATATGTTTTACCTAGTGGTGTACCTGcagaaagatttttaatattcattCCAAACAGTGGTCATAAATCTGAAGAAATGAGCAATGTTGTAAAGGATTTTCTTAATTCACACAATATACCAATTGAAAATTGTCGTGGCCAGAGCTACGACAATGCGAGAAATATGTCAGGTCAGTATTCTGGATTGCAGtcaagaattaaaagttttaattcatttgCAGAGTATGTACCATGTTCTGCACATTCTCTTAACTTGGTCGGAACGTGTGCAGCAGAAAGTTGAAATTCTgctacttcattttttatgctTCTCCAGGaactatacaattttttttctagttctaCTGCACGTTGggacattttaaaaacatatttgaagaaaaatcttagtgtaaaaaatttatcagtaACTCGCTGGAGTGCTCGTTTTGATGCTTTCCAtgctttatttaattcttatgcATTTATAATTGAAGCTTTTCATAGTATAGTTGATAATCAGAAAGAAAAAGCTGTATATAAAGTAGAAGCTAATGGGTTGCTTGCAagattaaaaactttagaaactGGTTTAATGATATGCATATGGAATTCAATATTAAACAGttttaatgctacaaataaaaaaatacaatcaacTGACATTGATCTTCATACATTATTAGACCTATATAATGGCCTTGAAAATTACTTGGTACAGATCAGAGatgattttgatgtttttgaaaataaggcTGTAGAAATTACTGATTGTTCGGAGTATGCCAAAGATtccaagagaaaaaaaaagagaaaggctaTGGCTGATGAATCAAGATCTCAACCTCTCACAGAAATCACAGggaaaatagattttattagaaatgtATATTATGTGATCATTGATACTCTTAAATGTCAACTTAGTTCAAGAAGACAAGcttatgaaaaaatatcagatatttatgtgtgtatacCTACATTGTATAAAACACCGAGTTCTATTGTTATAAGGAACACATGTGAAACTttggcaaaatattttattgatgatGTTGAAAACTCAAGCTTACTTATAGATGAGtgtattcttttttcaaaattaatttccacggaaaaaaatgtaaaatctgtTCTCTCTATGTATAAGTACATCAAGACCAAAGAATTAGAGTGTATGTTTCCAAATTTAGAAGTAGTTATGCCTATGTACCTTAGTACAGCAGTTTCAAACTGCTCAGGCGAAAGAGCTTTTTCtgtacttaaaaaagtaaaatcctACTTGAGGTCAACCATGAAGGAGGAAGGACTGAATGCATTAGCAATATTTAGCATTGAAGCAGAATTGGttgaaaaattagattttaatgaTACTATTAACACATTTGCCCAtcaaaaagcaagaaaaagaaaagtataaaataatggtttgttactttttgtaatatgattattttata

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052958	Family	Interferon-induced PKR regulator	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46289	52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20299	VPS53; vacuolar protein sorting-associated protein 53	-	Membrane trafficking	ko04131	deepkoala