Gene detail

Detailed information of XP_065656294.1 in Hydra vulgaris

Genomic Location: NC_088925.1:43682846...43731080
NR annotation: XP_047137957.1, C-1-tetrahydrofolate synthase, cytoplasmic-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_065800222.1

GATAGATgtattgtgaaatttttttgagcaaaaattaaattaatctttTGCTTTAATCTTTTTACATATTCTGCAGAACTTAGTTAAATCATTTAACAGAATGTGGAATATCACCAAGTTACCACTCAAGATACAAAGACCTGTTCCCAGTGATATTGCAATATCTCGTTCCCAAactccaaaaaatatttccactcTTGCTGAAGAAATCAGTTTACTGCCAGAAGAGGTGGAGCTTTATGGAAAATCAAAAGCCAAAATATCACTTGCAGTGTTAAATCGCTTGAAAGATTCGAAGGATGGAAAATATGTTGTTGTTACAGGaattactCCTACTCCATTAGGAGAAGGTAAAAGTACAACAACAATTGGATTAGCTCAAGCCTTGGGATCTACGCTAGAAAAACAAGCATTTGCCTGTGTTCGTCAACCTTCTCAAGGACCAACTTTTGGAATAAAAGgagGTGCTGCTGGAGGTGGCTATTCCCAAGTTATACCAATGGAAGAatttaatttgcaTTTAACTGGTGATATTCACGCCATCACTGCTGCAAACAACTTACTTGctGCTGCAATAGATGCAAGAATTCTACATGAGGCAACACAAAAAGATATGGCTCTATGGAATCGATTAGTTCCTATTAAAAACGGTGTTCGAACTTTTTCTCCTATTATGTTTAAAAGACTGAAaaAACTTGGAATTAACAAGACTGATCCTGACAGTTTAAATTCAAATGAAATAAGTAAATTTGTTCGATTGAACTTTGACAAAGATACCATCACTTGGCAAAGAGTAATGGATACAAATGACAGATTCTTGAGAAAGATAACAATTGGTCAAGCTCAAACTGAAATTGATCATGCGCGGGagtgtcaATTTGATATATCTGTGGGAAGTGAAATTATGGCCATACTTGCTCTGGCTACAAGCTTAAAAGATATGAGAGAAagaCTTGGTAATATTGTGGTTGCTAGTGATAAAGAAGAAAATCCAATAACTGCTGATGATTTGGGTGTTGGTGGTGCACTTACAGTTTTAATGAAGGATACAATAAAGCCTAATCTTATGCAAACTCTAGagGGAACTCCAGTGTTTGTTCATGCTGGTCCATTTGCAAATATTGCACATGGCAATTCATCTATAATTGCTGacaaaattgctttaaaaatggTTGGTGAAAATGGATTCGTTATTACTGAAGCTGGATTTGGAGCTGATATTGGcatggaaaaattttttaacatcaaatgTAGAAGCAGTGGTTTGGTACCAACTTGTGCTGTCATAGTTGCAACAATTAGAGCATTAAAAATGCATGGCGGTGGTCCAAAAGTAGTGGCAGGAACCCCGTTAGCCGAAGAATACAACACagagAATGTTGAACTTGTCACAAAAGGGTTttgtaacttaaaaaagcaaattgaAAACGCATTATTTTTTGGTGTTCCTGTTATTGTTGCACTGAATAAATTTCAGTCTGACACAGACAAGgaattaaatgttattatacaGCTTTCTAAACATGCTGGTGCATCAGATGCTGTTGTTTGTAGTCACTGGGCTGATGGAGGTAAAGGAGCAGAAGAACTTGCCAAGGCAGTTATTCATGTATCTAAccaagaaacaaattttaaatatctgtatgatttaaaaCTTCCTCTTGAGGAGAAAATAAAAGTGATTGCATGTAAAATATATGGTGCCGATGGCATTGAACTGTCAGAAAAAGCCAAGAAAAAGTTGTTAACATATACAAAACAAgGATTTCAAGATTTTCCCATATGTATGGCAAAAACACACTTATCTCTTTCATCAAACCCAGAACTGAAGGGGGCACCAACaggTTTTATTATACCTATCAGTGATGTTCGTGCAAGTGTTGGAGCAGGATTTATTTACCCTTTGGTTGGAACgaTGAGTACGATGCCTGGGTTACCCACAAGGCCTTGTTTTTATGATATTGATATTGATACTGAAACAGAGGAAGTTTTAGGATTAATGTAGGATGTGAGGATCTCTGTATAAGAATAAATcctaaagtaattaa

Protein

Uniprot

Uniprot term	Description
P11586	C-1-tetrahydrofolate synthase, cytoplasmic OS=Homo sapiens OX=9606 GN=MTHFD1 PE=1 SV=4
Q3V3R1	Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd1l PE=1 SV=2
Q922D8	C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01268	FTHFS	Formate--tetrahydrofolate ligase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000559	Family	Formate-tetrahydrofolate ligase, FTHFS	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR020628	Conserved_site	Formate-tetrahydrofolate ligase, FTHFS, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004329	Molecular Function	formate-tetrahydrofolate ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan