Detailed information of XP_065656896.1 in Hydra vulgaris

Genomic Location: NC_088926.1:3452602...3623867
NR annotation: XP_047123570.1, protocadherin Fat 4 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q99PF4Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2
P58365Cadherin-23 OS=Rattus norvegicus OX=10116 GN=Cdh23 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF01085HH_signalHedgehog amino-terminal signalling domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009045Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050971FamilyCadherin domain-containing proteinInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR001657FamilyHedgehog proteinInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR000320DomainHedgehog, N-terminal signalling domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24025DESMOGLEIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0007267Biological Processcell-cell signalingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16669FAT4; protocadherin Fat 4-Cell adhesion moleculesko04515deepkoala

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