Detailed information of XP_065657205.1 in Hydra vulgaris

Genomic Location: NC_088926.1:14060963...14088890
NR annotation: XP_012558903.1, general transcription factor IIF subunit 1 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3THK3General transcription factor IIF subunit 1 OS=Mus musculus OX=10090 GN=Gtf2f1 PE=1 SV=2
Q6AY96General transcription factor IIF subunit 1 OS=Rattus norvegicus OX=10116 GN=Gtf2f1 PE=1 SV=1
Q04870General transcription factor IIF subunit 1 OS=Xenopus laevis OX=8355 GN=gtf2f1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05793TFIIF_alphaTranscription initiation factor IIF, alpha subunit (TFIIF-alpha)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011039Homologous_superfamilyTranscription Factor IIF, Rap30/Rap74, interactionInterproscan
IPR008851FamilyTranscription initiation factor IIF, alpha subunitInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13011TFIIF-ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0032968Biological Processpositive regulation of transcription elongation by RNA polymerase IIInterproscan
GO:0001096Molecular FunctionTFIIF-class transcription factor complex bindingInterproscan
GO:0005674Cellular Componenttranscription factor TFIIF complexInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03138TFIIF1, GTF2F1, TFG1; transcription initiation factor TFIIF subunit alpha-Transcription machineryko03021deepkoala

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