Gene detail

Detailed information of XP_065659701.1 in Hydra vulgaris

Genomic Location: NC_088927.1:37615976...37674867
NR annotation: XP_047143359.1, COP9 signalosome complex subunit 1 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q13098	COP9 signalosome complex subunit 1 OS=Homo sapiens OX=9606 GN=GPS1 PE=1 SV=4
Q99LD4	COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1
P97834	COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21151	CSN1_C	COP9 signalosome complex subunit 1, C-terminal helix	Domain	Interproscan
PF10602	RPN7	26S proteasome subunit RPN7	Repeat	Interproscan
PF01399	PCI	PCI domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000717	Domain	Proteasome component (PCI) domain	Interproscan
IPR048624	Domain	COP9 signalosome complex subunit 1, C-terminal helix	Interproscan
IPR019585	Family	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR045135	Domain	26S proteasome regulatory subunit Rpn7, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14145	26S PROTESOME SUBUNIT 6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008180	Cellular Component	COP9 signalosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12175	GPS1, COPS1, CSN1; COP9 signalosome complex subunit 1	-	Ubiquitin system	ko04121	deepkoala