Gene detail

Detailed information of XP_065659702.1 in Hydra vulgaris

Genomic Location: NC_088927.1:37615976...37663787
NR annotation: XP_047143360.1, COP9 signalosome complex subunit 1 isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q99LD4	COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1
P97834	COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV=1
Q13098	COP9 signalosome complex subunit 1 OS=Homo sapiens OX=9606 GN=GPS1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10602	RPN7	26S proteasome subunit RPN7	Repeat	Interproscan
PF21151	CSN1_C	COP9 signalosome complex subunit 1, C-terminal helix	Domain	Interproscan
PF01399	PCI	PCI domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000717	Domain	Proteasome component (PCI) domain	Interproscan
IPR045135	Domain	26S proteasome regulatory subunit Rpn7, N-terminal	Interproscan
IPR048624	Domain	COP9 signalosome complex subunit 1, C-terminal helix	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR019585	Family	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14145	26S PROTESOME SUBUNIT 6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008180	Cellular Component	COP9 signalosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12175	GPS1, COPS1, CSN1; COP9 signalosome complex subunit 1	-	Ubiquitin system	ko04121	deepkoala