Genomic Location: NC_088927.1:39629150...39633746
NR annotation: XP_045128679.1, uncharacterized protein LOC123514690 [Portunus trituberculatus]
| CDS | |||||
| LOC136083825 | |||||
| Transcript |
| rna-XM_065803688.1 |
| Protein |
| XP_065659760.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-BED |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02892 | zf-BED | BED zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003656 | Domain | Zinc finger, BED-type | Interproscan |
| IPR052717 | Family | Vacuolar processing and transposase activity regulators | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46169 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K24637 | ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) | EC:2.3.2.- | Ubiquitin system | ko04121 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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