Genomic Location: NC_088927.1:43386425...43527115
NR annotation: XP_047130585.1, TNF receptor-associated factor 6-B-like isoform X1 [Hydra vulgaris]
| CDS | ||||
| LOC136083868 | ||||
| Transcript |
| rna-XM_065803775.1 |
| Protein |
| XP_065659847.1 |
| Uniprot term | Description |
|---|---|
| Q6DJN2 | TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1 |
| P70196 | TNF receptor-associated factor 6 OS=Mus musculus OX=10090 GN=Traf6 PE=1 SV=2 |
| B6CJY4 | TNF receptor-associated factor 6 OS=Cercocebus atys OX=9531 GN=TRAF6 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02176 | zf-TRAF | TRAF-type zinc finger | Family | Interproscan |
| PF15227 | zf-C3HC4_4 | zinc finger of C3HC4-type, RING | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR001293 | Domain | Zinc finger, TRAF-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10131 | TNF RECEPTOR ASSOCIATED FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0033209 | Biological Process | tumor necrosis factor-mediated signaling pathway | Interproscan |
| GO:0070534 | Biological Process | protein K63-linked ubiquitination | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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