Genomic Location: NC_088927.1:47850551...47899682
NR annotation: XP_047143403.1, meiosis regulator and mRNA stability factor 1 isoform X4 [Hydra vulgaris]
| CDS | |||||
| LOC136083911 | |||||
| Transcript |
| rna-XM_065803840.1 |
| Protein |
| XP_065659912.1 |
| Uniprot term | Description |
|---|---|
| B2GUN4 | Meiosis regulator and mRNA stability factor 1 OS=Xenopus tropicalis OX=8364 GN=marf1 PE=2 SV=1 |
| E1BZ85 | Meiosis regulator and mRNA stability factor 1 OS=Gallus gallus OX=9031 GN=MARF1 PE=3 SV=1 |
| Q8VIG2 | Meiosis regulator and mRNA stability factor 1 OS=Rattus norvegicus OX=10116 GN=Marf1 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13893 | RRM_5 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | Domain | Interproscan |
| PF01936 | NYN | NYN domain | Domain | Interproscan |
| PF12872 | OST-HTH | OST-HTH/LOTUS domain | Domain | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR025605 | Domain | OST-HTH/LOTUS domain | Interproscan |
| IPR021139 | Domain | NYN domain | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR041966 | Homologous_superfamily | LOTUS-like domain | Interproscan |
| IPR024768 | Family | Meiosis regulator and mRNA stability factor 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14379 | LIMKAIN B LKAP | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004540 | Molecular Function | RNA nuclease activity | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005777 | Cellular Component | peroxisome | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| GO:1905762 | Molecular Function | CCR4-NOT complex binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K17573 | LKAP, MARF1; meiosis arrest female protein 1 | - | Protein phosphatases and associated proteins | ko01009 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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